Gene Information

Name : RAM_39710 (RAM_39710)
Accession : YP_005535866.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_017186
Putative virulence/resistance : Unknown
Product : cytochrome C oxidase subunit I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8512583 - 8514370 bp
Length : 1788 bp
Strand : -
Note : COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1

DNA sequence :
GTGACGGCCGTAGCCCCCAAGCCGATCGCCACGCGCCCGTACCCCGCGCGCGAGTCGGTTAAGGGTTCGTACCTGCTGCG
GTTGTTCCGCACGACGGACCACAAGCAGATCGGGATCATGTACCTGGTCACGTCGTTCGCCTTCTTCATGGCGGGCGGCG
CGATGGCCATGCTGATCCGCACCGAGCTGGCGCGGCCCGGGCAGCAGTTCCTGTCCCAGGAGCAGTACAACCAGCTGTTC
ACCATGCACGGCACGGTGATGCTGCTGCTGTACGCGACCCCGATCCTCTTCGGCTTCGCGAACTTCGTGCTGCCGCTGCA
GATCGGCTCGCCGGACGTCGCCTTCCCGCGGCTGAACGCGTTCTCGTACTGGCTGTACCTCTTCGGCGGCCTGATCGTGC
TGTCCGGCTTCCTGACGCCCGGTGGCGCCGCCGACTTCGGCTGGTTCGCCTACACCCCGCTGTCGGACGCCATCCACTCG
CCGGGTGTCGGCGCGGACCTGTGGATCTCCGGCCTGGTCGTCTCCGGTCTCGGCACCATCCTCGGCGCGGTCAACATGAT
CACCACCGTGGTCTGCCTGCGCGCGCCGGGCATGACGATGTACCGGATGCCGATCTTCACCTGGAACATCCTGGTGACGT
CGATCCTGATCCTGCTCGCCTTCCCGATCCTGACCGCGGCCCTGATGGGCCTGCTGGCGGACCGGCACCTCGGGGCGCAC
GTGTTCGACCCCGAAAACGGCGGCGTGATCCTCTGGCAGCACCTGTTCTGGTTCTTCGGCCATCCCGAGGTGTACATCGT
CGCGCTGCCGTTCTTCGGCATCGTGTCGGAGATCTTCCCGGTGTTCAGCCGCAAGCCGCTGTTCGGCTACAAGAGCCTGG
TCTGGGCGACGCTGGCCATCGCGGCGCTGTCGGTCGCGGTGTGGGCGCACCACATGTACGCCACCGGCGCCGTGCTGCTG
CCGTTCTTCTCCTTCATGACGTTCCTGATCGCCGTCCCGACCGGCATCAAGTTCTTCAACTGGATCGGCACGATGTGGAA
GGGCCAGCTGTCCTTCGAGACGCCGATGATCTTCTCGATGGGCTTCATCGTCACGTTCCTCTTCGGCGGCCTGACCGGCA
TCCTGCTGGCCGCGCCGGCGATCGACTTCCACGTGTCGGACAGCTACTTCGTCGTCGCGCACTTCCACTACGTGCTCTAC
GGCACGATCGTGTTCGCCACCTTCGCCGGCATCTACTTCTGGTTCCCGAAGATCACCGGCCGGATGATGGACGAGAAGCT
CGGCAAGTGGCACTTCTGGACCACGTTCATCGGCTTCCACGGCACGTTCCTCGTCCAGCACTGGCTGGGTGCCGAGGGCA
TGCCGCGCCGGTACGCGGACTACCTGACCAGTGACGGCTTCACCACGCTGAACACGATCTCCACGATCGGCGCGTACATC
CTCGGTGCCTCGACGCTGCCGTTCATCTGGAACGTCTTCAAGAGCTACCGGTACGGCGAGATCGTCACGGTGGACGACCC
GTGGGGCTACGGCAACTCGCTCGAGTGGGCGACCTCCTGCCCGCCGCCGCGGCACAACTTCACCGAGCTGCCCCGGATCC
GCTCCGAGCGGCCCGCGTTCGAGCTGCACTACCCGCACATGATCGAGCGCATCCACAACGAGGGTGAGATCGGCTTCTTC
GGGAAGCAGAAGGTCAACAGCCACGCGGCGCCTTCGCAGCTGCTCACCGAAGCGGTGATCCCGGGAGACCACTCCAACGA
CAACGCGAGCGAGCAAGGCGAAAAGTAG

Protein sequence :
MTAVAPKPIATRPYPARESVKGSYLLRLFRTTDHKQIGIMYLVTSFAFFMAGGAMAMLIRTELARPGQQFLSQEQYNQLF
TMHGTVMLLLYATPILFGFANFVLPLQIGSPDVAFPRLNAFSYWLYLFGGLIVLSGFLTPGGAADFGWFAYTPLSDAIHS
PGVGADLWISGLVVSGLGTILGAVNMITTVVCLRAPGMTMYRMPIFTWNILVTSILILLAFPILTAALMGLLADRHLGAH
VFDPENGGVILWQHLFWFFGHPEVYIVALPFFGIVSEIFPVFSRKPLFGYKSLVWATLAIAALSVAVWAHHMYATGAVLL
PFFSFMTFLIAVPTGIKFFNWIGTMWKGQLSFETPMIFSMGFIVTFLFGGLTGILLAAPAIDFHVSDSYFVVAHFHYVLY
GTIVFATFAGIYFWFPKITGRMMDEKLGKWHFWTTFIGFHGTFLVQHWLGAEGMPRRYADYLTSDGFTTLNTISTIGAYI
LGASTLPFIWNVFKSYRYGEIVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHMIERIHNEGEIGFF
GKQKVNSHAAPSQLLTEAVIPGDHSNDNASEQGEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1478 YP_001800872.1 cytochrome c oxidase subunit I Not tested Not named Protein 0.0 73