Gene Information

Name : RAM_39680 (RAM_39680)
Accession : YP_005535860.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_017186
Putative virulence/resistance : Unknown
Product : ATP-dependent DNA helicase DinG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8507438 - 8509393 bp
Length : 1956 bp
Strand : +
Note : COG1199 Rad3-related DNA helicases

DNA sequence :
ATGGCCGACGCCGTCGGCCGCGCCATCCGCACCGGCGAACACCTGGCCGTGCAGGCCGGCACCGGCACCGGCAAGTCGCT
GGCCTACCTCGTGCCCGCGATCCGGCACGCCGTCGAGAAGGAAGCCACGGTCGTGGTCTCCACGGCCACGATCGCGCTGC
AGCGCCAGCTCGTCGACCGTGACCTCCCACGCCTGGCGAAGGCGCTGAAGAAGCCGCTCGGCCGCGAGCCGACCTTCGCG
ATCCTCAAGGGCCGCCGCAACTACATGTGCCTGCACCGGCTGGATTCCGGCGCGCCGGACGAGCCGGAGGACGCCCAGCT
GTTCGACCCGTTCGCGGTGTCCCGGCTGGGCAAGGAGGTCACGCGGCTGCGGGAGTGGGCGTCGGACACCGAAACCGGCG
ACCGCGACGAGCTCGTTCCCGGCGTCACCGACCAGGCGTGGCGTCAGGTTTCGGTGACGGCGAAGGAATGTCTCGGCGCT
TCACGCTGTCCGATCGGCACGGACTGCTTCGCCGAGAAGGCCCGCGCCGAAGCCGGCCGCGCCGACGTCATCGTCACCAA
CCACGCGCTGCTGGCGATCGACGCGCTGCAGGGCTACCAGGTTCTGCCGGACCACGACGTGGTGATCATCGACGAGGCCC
ACGACCTGGTCGACCGGGTCACCTCGGTGGCCACCGGCGAGCTGACCAGCGCGATGTGCGCGTCGGCCGCGCGCCGCTGC
GGAAAACTCATCGACGCCGACGTCGCCGACGGCCTGCTGGAAGCGGGTGACGGGCTGGCCCTGATCATCGACGACCTGCC
CGCGGGCCGGATGGACGAGCTGCCCCGGCCGCTGCAGGGCGCGATCCCGGCGATCCGCGACGCCGCACACCGGTGCATCA
CGGCGCTGGGTTCCGACCGCAAGGAAGACGTCGAGGGGGCCACGGCGCGCAAGCTGGCGCGGTCGCTGCTCGACGAGGTG
CACGACACCGCCGTCCGGCTGCTGGAGGCGTTCGACGAGGACCAGGCGCACCAGCGCGACGTCGTCTGGCTCTCCGGCGA
CAAGTACTCGTCGAACCCGCGGCCACCGGCGCTGAAGGTGGCGCCGCTGGGCGTCGCCGGCCTGCTGCGGGAGCGGGTGT
TCAACCAGCACACGACGATCCTGACGTCGGCGACGCTGACGCTGGGCGGCACGTTCGACACCATGGCGCGCCAGTGGGGG
CTCCCGCCGGGCGCGGCCCGGGTGGAACAGGCGCCCGGAGCCGCCACGGAGAAGGAAGCGCCGTCGGACGACTCGGGCCC
GAAGTGGACCGGACTGGACGTCGGCTCGCCGTTCGACCACCGGCGCAACGGGATCCTGTACCTCGCCAAGCACCTGCCGC
CACCGGGGCGCGACGGCCTCACGTCGTCCACAATGGACGAACTGGCCGAGCTGATCGAGGCCGCGGGCGGGCGCACGCTG
GGCCTGTTTTCCTCGATGCGGGCGGCCAAGCAGGCCACGGAGGAGATGCGGGAACGGCTGGACTTCCCGATCCTGTGCCA
GGGCGACGACGCAACGTCGCTGCTGGTCCAGAAGTTCTCCGAAGACGTCCGCACGTGCCTGTTCGGCACGTTGAGCCTGT
GGCAGGGCGTGGACGTCCCCGGGCCGTCACTGCAGCTCGTGGTGGTCGACCGGATCCCGTTCCCGCGCCCGGACGACCCG
GTGTCCTCGGCGCGGCAGCGCGCGGTGGAAGCCCGCGGCGGCAACGGGTTCCTCACCGTGGCGGCCACGCACGCGGCGCT
GCTGCTGGCGCAGGGCACCGGGCGGCTGCACCGGTCGGTCACCGACCGCGGCGTGGTGGCAGTGCTGGATTCGCGGCTGG
CGAACGCCCGCTACGGCGGTTTCCTGCGTGCGTCGCTGCCGCCGTTCTGGCCCACCATGGACCCGAAGGTGGTGCGGGAG
GCACTGCGCCGGCTGGACGCAGCCGCGCCCGCGTGA

Protein sequence :
MADAVGRAIRTGEHLAVQAGTGTGKSLAYLVPAIRHAVEKEATVVVSTATIALQRQLVDRDLPRLAKALKKPLGREPTFA
ILKGRRNYMCLHRLDSGAPDEPEDAQLFDPFAVSRLGKEVTRLREWASDTETGDRDELVPGVTDQAWRQVSVTAKECLGA
SRCPIGTDCFAEKARAEAGRADVIVTNHALLAIDALQGYQVLPDHDVVIIDEAHDLVDRVTSVATGELTSAMCASAARRC
GKLIDADVADGLLEAGDGLALIIDDLPAGRMDELPRPLQGAIPAIRDAAHRCITALGSDRKEDVEGATARKLARSLLDEV
HDTAVRLLEAFDEDQAHQRDVVWLSGDKYSSNPRPPALKVAPLGVAGLLRERVFNQHTTILTSATLTLGGTFDTMARQWG
LPPGAARVEQAPGAATEKEAPSDDSGPKWTGLDVGSPFDHRRNGILYLAKHLPPPGRDGLTSSTMDELAELIEAAGGRTL
GLFSSMRAAKQATEEMRERLDFPILCQGDDATSLLVQKFSEDVRTCLFGTLSLWQGVDVPGPSLQLVVVDRIPFPRPDDP
VSSARQRAVEARGGNGFLTVAATHAALLLAQGTGRLHRSVTDRGVVAVLDSRLANARYGGFLRASLPPFWPTMDPKVVRE
ALRRLDAAAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1474 YP_001800868.1 ATP-dependent DNA helicase Not tested Not named Protein 5e-138 53