|
Name : RAM_03870 (RAM_03870) Accession : YP_005528723.1 Strain : Amycolatopsis mediterranei S699 Genome accession: NC_017186 Putative virulence/resistance : Resistance Product : arsenite efflux pump protein Function : - COG functional category : - COG ID : - EC number : - Position : 817017 - 818081 bp Length : 1065 bp Strand : - Note : COG0798 Arsenite efflux pump ACR3 and related permeases DNA sequence : ATGACGGACGAGGTCGCCGGCAGGCTCTCCACGCTGGACCGGTTCCTGCCCGGGTGGATCGCCGCCGCCATGGTCGCCGG GCTGCTCGCCGGCCGCTGGGTGCCCGGGCTGGACACCGCGCTGTCCGCCGTGCAGGTGGACGGGATCTCGCTGCCGATCG CGCTCGGGCTGCTGGTGATGATGTACCCGGTCCTGGCGAAGGTCCGCTACGACCGGCTCGGCAGCGTCACCCGCGACCGC CGGCTGCTGTGGCCGTCGCTGGTGCTGAACTGGCTCGCCGGCCCGGCCCTGATGTTCGCGCTGGCCTGGCTGCTCCTGCC CGACCTGCCGGAGTACCGGACCGGGCTGATCATCGTCGGCCTCGCCCGCTGCATCGCCATGGTCGTCATCTGGAACGACC TCGCCTGCGGCGACCGCGAGGCCGCCGCCGTGCTCGTCGCCCTGAACTCGGTGTTCCAGGTGCTCGCGTTCGGCCTGCTC GGCTGGTTCTACCTGACCGTCCTCCCCGGCTGGCTCGGCCTCCCCCAAGCCGGCCTCGCCGTCTCCGGCTGGCAGATCGC GAAAAACGTGCTGATCTTCCTCGGCATCCCGCTCCTGGCCGGCTACCTCACCCGCCGGCTCGGCGAGCGAGCCAGGGGGC GCACCTGGTACGAGACGCGGTTCCTGCCGAAGATCGGCCCGGCCGCCCTCTACGGGCTGCTGTTCACCATCGTGATCCTC TTCGCCCTGCAAGGAGACCGGATCACCGCGCGGCCGCTGGACGTCGTCCGCATCGCCGTGCCGCTGCTGGTCTACTTCGG ACTGATGTGGGCCGGGTCGTACGCGTTCGGCAAGGCGGCGGGCCTGTCGTACGAGCGCACCACGACGCTGGCGTTCACCG CGGCGGGCAACAACTTCGAACTCGCCATCGCCGTGGCCATCGCCACGTTCGGCGCGACCAGCGGCCAGGCGCTGGCGGGG GTCGTCGGCCCGCTGATCGAGGTCCCGGTGCTCGTCGCGCTCGTGTACGTGTCCCTGGCGCTGCGCCGCCGCTTCACCCC CGCTCCCGTGGAGGTCACCCCGTGA Protein sequence : MTDEVAGRLSTLDRFLPGWIAAAMVAGLLAGRWVPGLDTALSAVQVDGISLPIALGLLVMMYPVLAKVRYDRLGSVTRDR RLLWPSLVLNWLAGPALMFALAWLLLPDLPEYRTGLIIVGLARCIAMVVIWNDLACGDREAAAVLVALNSVFQVLAFGLL GWFYLTVLPGWLGLPQAGLAVSGWQIAKNVLIFLGIPLLAGYLTRRLGERARGRTWYETRFLPKIGPAALYGLLFTIVIL FALQGDRITARPLDVVRIAVPLLVYFGLMWAGSYAFGKAAGLSYERTTTLAFTAAGNNFELAIAVAIATFGATSGQALAG VVGPLIEVPVLVALVYVSLALRRRFTPAPVEVTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB | ADZ05767.1 | arsenic resistance protein | Not tested | AbaR11 | Protein | 1e-60 | 53 |
| arsB | AFC76433.1 | ArsB | Not tested | AbaR5 | Protein | 3e-74 | 52 |
| arsB | CAJ77016.1 | transmembrane protein of arsenate pump | Not tested | AbaR1 | Protein | 2e-74 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RAM_03870 | YP_005528723.1 | arsenite efflux pump protein | BAC0573 | Protein | 2e-79 | 54 |
| RAM_03870 | YP_005528723.1 | arsenite efflux pump protein | BAC0004 | Protein | 3e-63 | 46 |
