Gene Information

Name : RAM_33510 (RAM_33510)
Accession : YP_005534632.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_017186
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7218152 - 7218922 bp
Length : 771 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
GTGAAACTCGTCTTCGACGGCGTCACCGCCGGCTATGCGGACGTACCCGCGGTGCACGACGTGACCCTGACGATCGCGAA
GGGCGAGTTCGTGGCGGTGGTCGGCCCGAACGGCAGCGGGAAGTCCACTCTGCTCAAGACGGTCTACCGGGCGCTGCGCC
CACGGACGGGCGCGGTGCTGCTCGGTGCCGAGGACGTCTGGACGGTCAAGCACCGCCAGGTCGCCCGCCGCGTCGGCGTG
CTGGGCCAGGACCAGGCCGGCGGGTACGACTTCACCGCGCGGGAGGCGGTCCGGCTCGGGCGGTACCCGCACCTCGGCGC
GTTCGACCGGCTTTCGGCGGCGGACGAGAAGGTCGTCACCGAAGCGCTGGAACGCACCGGCGCCGGCGAGTTCGCGGACC
GGCCACTGTCCACATTGTCCGGCGGAGAACGGCAGCGGGTGCTGCTGGCCAGAGCCCTGGCACAGCAACCCGAAGTGCTG
GTGCTGGACGAACCCACCAACCACCTCGACCCCGCGCACCAGATCTCCGCACTGGGCCTGGTCGCCTCGCTCGGCGTCAC
CGTCGTGGCGGCCCTGCACACGCTGGACCTCGCCGCCCGGCACGCCACGACGATCGTCGCCCTGAAGGCGGGCACGATCG
CCGCGGCCGGGCCACCGGCCGAAGTGCTCACGCGCGAAATCTTCCGCGAGGTTTTCGCGGTGGACGGGAGCGTGATTCCC
GACCCGGTCGACGGGCGGCCCCGCGTGCTGCTCCGCGAACTGTCCGGCTGA

Protein sequence : 
MKLVFDGVTAGYADVPAVHDVTLTIAKGEFVAVVGPNGSGKSTLLKTVYRALRPRTGAVLLGAEDVWTVKHRQVARRVGV
LGQDQAGGYDFTAREAVRLGRYPHLGAFDRLSAADEKVVTEALERTGAGEFADRPLSTLSGGERQRVLLARALAQQPEVL
VLDEPTNHLDPAHQISALGLVASLGVTVVAALHTLDLAARHATTIVALKAGTIAAAGPPAEVLTREIFREVFAVDGSVIP
DPVDGRPRVLLRELSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-44 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 5e-39 41
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 4e-27 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 4e-27 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RAM_33510 YP_005534632.1 iron ABC transporter ATPase BAC0164 Protein 5e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RAM_33510 YP_005534632.1 iron ABC transporter ATPase VFG1042 Protein 5e-44 42
RAM_33510 YP_005534632.1 iron ABC transporter ATPase VFG0925 Protein 3e-42 42