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Name : RAM_25645 (RAM_25645) Accession : YP_005533064.1 Strain : Amycolatopsis mediterranei S699 Genome accession: NC_017186 Putative virulence/resistance : Virulence Product : cobalamin/iron ABC transporter ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 5575715 - 5576518 bp Length : 804 bp Strand : + Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components DNA sequence : ATGACACCGTCCCTGCGCGTGCGGGACCTGCGCGTCGCCTACGACGACCGGGTCGTCATCGACGGCCTCGACCTCGACAT CCCGGCCGGCAAGATCACCGCGATCGTCGGGCCGAACGCGTGCGGCAAGTCGACGCTGCTGCGCACGCTGGCCCGGCTGC TGACGCCGAAGTCCGGCGGGGTGTACCTGGACGGCCGTTCGATCCACGACCTGCCGACCCGCCAGGTCGCCCAGCGGCTC GGCATCCTGCCGCAGTCCCCGGTGGCCCCCGAGGGCATGACGGTGGCCGACCTCGTCGGCCGCGGCCGCGCTCCGCACCA GCGCTGGTGGCGCCAATGGTCCACATCGGACGAAGGCGCGATCCGCGCGGCCCTGGACGCCACCTCGCTGCTGGACCTCG CCGACCGCCCGGTGGACGAGCTGTCCGGCGGCCAGCGCCAGCGCGCGTGGATCGCGATGGCGATCGCGCAGGGCACGCCG GTGCTGCTGCTCGACGAGCCGACGACGTACCTGGACCTGGCCCACCAGATCGACGTGCTGGACCTGGTCGTCGACCTCAA CCGCGCCGAGGGCCGCACCGTGGTGATGGTGCTGCACGACCTCCCCCAGGCGTGCCGGTACGCCGACCACGTGATCGCGA TGAAGGCGGGCCGCGTGGTGGCTTCCGGCGAGCCGGCGTCGGTGATCACCGAGAGCCTGGTCGAGGAGGTCTTCGACGTC CGCTGCCAGGTCACCCCGGACCCGGTGAGCGGGACGCCGATGGTCATCCCGATCAGCCGGCACCACCCGGCCCCGGTGCA CTAG Protein sequence : MTPSLRVRDLRVAYDDRVVIDGLDLDIPAGKITAIVGPNACGKSTLLRTLARLLTPKSGGVYLDGRSIHDLPTRQVAQRL GILPQSPVAPEGMTVADLVGRGRAPHQRWWRQWSTSDEGAIRAALDATSLLDLADRPVDELSGGQRQRAWIAMAIAQGTP VLLLDEPTTYLDLAHQIDVLDLVVDLNRAEGRTVVMVLHDLPQACRYADHVIAMKAGRVVASGEPASVITESLVEEVFDV RCQVTPDPVSGTPMVIPISRHHPAPVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iusE | YP_005143742.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 1e-56 | 51 |
| fecE | AAL08451.1 | ATP-binding protein FecE | Virulence | SRL | Protein | 4e-53 | 50 |
| fagC | YP_005680307.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 8e-56 | 49 |
| fagC | YP_003782430.1 | ABC transporter ATP-binding protein | Not tested | PiCp 1 | Protein | 8e-56 | 49 |
| fagC | YP_005682397.1 | ATP binding cytoplasmic membrane protein | Virulence | PiCp 1 | Protein | 7e-56 | 49 |
| fagC | YP_005684488.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 7e-56 | 49 |
| DIP0585 | NP_938961.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 3e-46 | 46 |
| SPN23F_09560 | YP_002510939.1 | ferric siderophore ABC transporter ATP-binding protein | Virulence | PPI-1 | Protein | 1e-55 | 45 |
| SP_1035 | NP_345510.1 | iron-compound ABC transporter ATP-binding protein | Not tested | PPI-1 | Protein | 1e-55 | 45 |
| CDCE8392_1767 | YP_005134301.1 | iron complex transport system ATP-binding protein | Virulence | Not named | Protein | 1e-31 | 43 |
| ciuD | YP_005685432.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 3e-46 | 42 |
| ciuD | YP_005681255.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 3e-46 | 42 |
| ciuD | YP_005683346.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 3e-46 | 42 |
| ciuD | YP_003783391.1 | iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 3e-46 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RAM_25645 | YP_005533064.1 | cobalamin/iron ABC transporter ATPase | BAC0164 | Protein | 2e-53 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RAM_25645 | YP_005533064.1 | cobalamin/iron ABC transporter ATPase | VFG0925 | Protein | 1e-59 | 51 |
| RAM_25645 | YP_005533064.1 | cobalamin/iron ABC transporter ATPase | VFG1042 | Protein | 2e-53 | 50 |
