|
Name : RAM_25640 (RAM_25640) Accession : YP_005533063.1 Strain : Amycolatopsis mediterranei S699 Genome accession: NC_017186 Putative virulence/resistance : Virulence Product : iron ABC transporter permease Function : - COG functional category : - COG ID : - EC number : - Position : 5574652 - 5575710 bp Length : 1059 bp Strand : + Note : COG4779 ABC-type enterobactin transport system, permease component DNA sequence : ATGAGCCTGCTGCACGTGCGGCGCGACCGCGTGACCTTCCGCCTCGCGAAACCCGCGGTGTCCGGTCAGATCCGGCTCCG GCTGGTGGCCGTCTCGCTCGTGCTCGCCGTGCTGGCGTTCGCGTTGTTTTGCGTGGGCATGACGATCGGCGACGTCCCGC TCAGCATGTCCGACGTCCTGTCCGCGGTGTTCGGCGGCGGCGACAGCGGCACCGGCTACATCGTGCAGGAGCTGCGGCTG CCGCGGGCGCTGACCGGGCTGCTGGCCGGGCTCGCGTTCGGCGCGTCCGGCGCGGTGTTCCAGACCATCACGCGCAACCC GCTGGCCGGCCCGGACCTGATCGGCATCAACGCGGGCGCGGCCACCGCCGTCGTCGCCGGGATCTCCTTCGGCTTCGGCG GCGGCCTCGGCACCACCACGCTCGGCCTGCTGGGCGGGCTGCTGACCGGCCTGCTCGTGTACGTCCTGGCGTGGCGGCGC GGCACCACCGGCTACCGGATCATCCTGGTGGGCATCGGCATCTTCGCGATGTGCACCAGCCTGACCGACTACCTGCTCAG CCGCGCGCAGATCACCGAAGCCCAGGCGTCGATCGGCTGGCTGGTCGGCAACCTCGCCAACCGCGGCTGGGAGCACGTCG TCCCGCTGGCCGGCGCGCTGGCGGTGCTGCTGCCGCTCGTGCTGGCCCTGTCGCGGTGGATGCGCACGCTGCAGCTCGGC GACGACGTGGCGGCCGGGCTCGGCACGCCGGTGCAGCCGGTCCGGCTGGGGCTGCTGCTGGCCGGCGCCGGGCTGGTGGC CTTCGCGACGGCGTCCGCCGGCCCGATCTCGTTCGTCGCGCTGACCGCGCCGCAGATCGCGCAACGCCTGGCGCGCCGGC CATCCCCGCCGCTCATCGCGTCCGCGCTCACCGGCGCGGTGGTGGTGCTGGGCAGCGACCTCCTGGCCCGCACCCTCACC GCGTCCCCGCTGCCGGTCGGCATAGTGACCGGCGCGCTCGGCGCCCCGCTGCTGCTCTGGCTGCTGGCCAGGGCCAACCG ATCCGGCTCCGGAGGCTGA Protein sequence : MSLLHVRRDRVTFRLAKPAVSGQIRLRLVAVSLVLAVLAFALFCVGMTIGDVPLSMSDVLSAVFGGGDSGTGYIVQELRL PRALTGLLAGLAFGASGAVFQTITRNPLAGPDLIGINAGAATAVVAGISFGFGGGLGTTTLGLLGGLLTGLLVYVLAWRR GTTGYRIILVGIGIFAMCTSLTDYLLSRAQITEAQASIGWLVGNLANRGWEHVVPLAGALAVLLPLVLALSRWMRTLQLG DDVAAGLGTPVQPVRLGLLLAGAGLVAFATASAGPISFVALTAPQIAQRLARRPSPPLIASALTGAVVVLGSDLLARTLT ASPLPVGIVTGALGAPLLLWLLARANRSGSGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagB | YP_005684489.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 3e-21 | 43 |
| fagB | YP_005680308.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 1e-21 | 43 |
| fagB | YP_005682398.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 3e-21 | 43 |
| fagB | YP_003782431.1 | integral membrane protein | Not tested | PiCp 1 | Protein | 3e-21 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RAM_25640 | YP_005533063.1 | iron ABC transporter permease | VFG0928 | Protein | 4e-20 | 41 |
