Gene Information

Name : hemC (RAM_02470)
Accession : YP_005528443.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_017186
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 485381 - 486310 bp
Length : 930 bp
Strand : +
Note : COG0181 Porphobilinogen deaminase

DNA sequence :
ATGGGTACGCGTGGTTCGAAGCTCGCCCTCACCCAGACCGGGACCGTCGCCGACGCCCTGCGCGCCACCGGCGTCGAGGT
CGAGATCGTCAAGGTGACCACCCCCGGCGACAAGTCGCTGGCGCCGATCGCGACGATCGGGGTCGGCGTGTTCACCTCCG
CGCTGCGGGAAGCCTTGCTGCGCAACGAGGTCGACGTCATCGTCCACTCCTACAAGGACCTGCCGACGGCGCCGGAGCCC
GGGATCACGCTGGCCGCCGTGCCGCCCCGCGAAGACCCGCGGGACGCGCTGATCGCGCGCGACGGGCTCACGCTGGGTGA
GCTGCCGCCGGGTTCGACGGTGGGCACGGGGGCCGCGCGGCGCACCGCGCAGCTGCGTGCGCTGGGTCTCGGTTTGGAAA
TCGTGCCGATTCGCGGCAATATCGACACCCGCATGCGCAAGGTGACCGACGGCGAGCTCGATGCCGTGGTGCTGGCGCGT
GCCGGACTGGCCAGGGTCGGACTGGTCGAGGCGATCACCGAGACCCTCGACCCGATCCAGATGCTGCCCGCGCCCGCACA
GGGTGCACTGGCGGTGGAGTGCCGGTCCGCCGACGTGGACCTCGAGCACCTGCTCCGGTCCACTTTGGACGACGAGGGCA
CGCGGGCCGCGGTGACGGCCGAGCGGGCCCTGCTGGCCGCGCTCGAGGCGGGGTGCAGTGCGCCGGTGGGCGCGCTCGCC
GAGATCGTCGAAGATCTCGACGCCGAGGGCAAGGTCGTGGAACGGATCTCGCTGCGCGGCACCGCCGCGATCGAGGGCGA
GGAAGGTGCGGTGGACATGGTCCGGGCCATCGCACTGGCCGACAAGGACCAGGCTGCCCAGCTGGGCAAGGACCTGGCCG
CCGAGCTGCTGGACCTCGGAGCCGGAGCCCTCTCCGGTCCCGCTCAGTAG

Protein sequence :
MGTRGSKLALTQTGTVADALRATGVEVEIVKVTTPGDKSLAPIATIGVGVFTSALREALLRNEVDVIVHSYKDLPTAPEP
GITLAAVPPREDPRDALIARDGLTLGELPPGSTVGTGAARRTAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLAR
AGLARVGLVEAITETLDPIQMLPAPAQGALAVECRSADVDLEHLLRSTLDDEGTRAAVTAERALLAALEAGCSAPVGALA
EIVEDLDAEGKVVERISLRGTAAIEGEEGAVDMVRAIALADKDQAAQLGKDLAAELLDLGAGALSGPAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 7e-24 42
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 7e-24 42