Gene Information

Name : RAM_22180 (RAM_22180)
Accession : YP_005532373.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_017186
Putative virulence/resistance : Unknown
Product : Fe-S oxidoreductase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4765286 - 4767388 bp
Length : 2103 bp
Strand : +
Note : COG0247 Fe-S oxidoreductase

DNA sequence :
GTGCTCGTTCGTCTCATCCTCGGCCTGCTCATGACCGTCGTCGGCCTCGCCGTCGCCGGCAAGCGCGTGGCCTTCCTGTA
CCGGCTGATCAAGGCCGGCCAGCCCGACACCAAACGGTCGGACGACCTCGGTGCCCGCGTCTTCGCGCAGGTGCGCGAGG
TGTTCGGCCAGCGCAAGCTGCTGAAGTGGTCGGTGCCCGGCCTGGCGCACTTCTTCACGTTCTGGGGCTTCGTGATCCTC
GCTTCGGTGTACCTCGAGGCGTACGGCGCGCTCTTCGACGAGAAGTTCGCCATCCCGTGGATCGGCCACTGGGCGGTGCT
CGGCTTCCTGCAGGACTTCATCGCCGTCGCCGTGGCGGTTTCGCTCGGCGTGTTCACGATCATCCGCATCCGGAACGCCC
CCGAGCGCAAGGATCGCGCGTCGCGGTTCTACGGCTCGCACACCGGCGGCGCGTGGCTGATCCTCGCCATGATCTTCAAC
GTCGTCTGGACGATGTTCTTCTTCCGCGGCGCCTCTTCGGCGTCCGGCAACTTTCCGTACGACAACGGCGCGTACGTCTC
GCTCGGCGTCGGGAACCTCCTGGAGCCGCTCGGGCACTCGACGACCGAGGTGCTGGAGACGGTCGGCCTGCTCCTGCACA
TCGGCGTCATGCTGGTGTTCCTGTCGATCGTGCTCTACTCCAAGCACCTGCACATCTTCGTCGCGCCGCTCAACGTCTCG
GCGAAGCGGCTGCCGGACGCGCTCGGCCCGCTGCTGCCGATGGAGTCCGCGGGCAAGCCGATCGACTTCGAGGACCCCGC
CGAAGACGACACGTTCGGCCGCGGGAAGATCGGCGACTTCACGTGGAAGGGCATGCTCGACTTCGCCACGTGCACCGAAT
GCGGCCGCTGCCAGTCGCAGTGCCCGGCGTGGAACACCGGGAAGCCGTTGTCACCCAAGCTCGTCATCATGAACCTGCGC
GACAACCTGTTCGAGGAAGCGCCCTACATCCTGGCGGGCACCGAGCACGAGGGCGCGCGCCCGCTGGTCGGGCCGGAGGA
CGACGGCGGTGTGATCGATCCGGACGTGCTCTGGTCGTGCACGACCTGCGGTGCGTGCGTCGAGCAGTGCCCGGTGGACA
TCGAGCACGTCGACCACATCGTCGACATGCGCCGCTACCAGGTGATGATCGAGTCGGCGTTCCCGACCGAGCTGGGCGGG
CTGTTCAAGAACCTGGAGACCAAGGGCAACCCGTGGGGCCAGAACAACGCGGAGCGCCTCACCTGGACCAAGGACCTGGG
CTTCGACGTCCCGGTGTTCGACGGCGAGCTGGCCGAGGACGTCGAGTACGTCTACTGGGTCGGCTGCGCCGGCGCGTTCG
ACGACCAGGCGCGCAAGACCGTCCGCGCCACGGCGGAGCTGCTGCACATCGCCGGGGTGAGGTACGTGGTGCTGGGCAAG
GAGGAGTCCTGCACCGGTGATCCGGCGCGCCGCGCGGGCAACGAGTTCCTCTTCCAGATGATGGCGCAGCAGACGGCGGA
GACGCTGAACGCCGTGTTCGAGGGCCGCGAGCCGCGGCTGCGCAAGATCGTCACGACCTGCCCGCACTGCCTGAACACGC
TGAGCCGCGAATACCCCCAGCTGGACGGCCACTACGAGGTGGTCCACCACACGCAGCTGCTCAACCGCCTGGTCCGCGGC
GGGCAGCTGACCCCGGTGAAGCCGGTCGAGGACGGCCCGAAGGTCACCTACCACGATCCCTGCTACCTGGGCCGTCACAA
CAAGGTCTACACGCCACCGCGCGAGCTGGTCGGCGCGACGGGCGCCCAGCTGGCGGAGATGCCCCGCCACGCGGACCGCG
CCCTCTGCTGCGGCGCCGGCGGCGCCCGCATGTGGATGGAGGAGCAGATCGGCAAGCGCATCAACCTGGAGCGGGTCGAC
GAGGCGATCGCCACGGACGCGGAGACGATCGTGACGGGCTGCCCGTTCTGCCGCGTGATGCTGACCGACGGCCTGGTCCA
GCGCCAGAGCGAGCAGAAGGCGGAGAACGTCGACGTGCGCGATGTCGCCCAGCTGCTGCTGGAACGGGTGAAAGCCGCGG
ACACCTCGGCGCCGACGGTCTGA

Protein sequence :
MLVRLILGLLMTVVGLAVAGKRVAFLYRLIKAGQPDTKRSDDLGARVFAQVREVFGQRKLLKWSVPGLAHFFTFWGFVIL
ASVYLEAYGALFDEKFAIPWIGHWAVLGFLQDFIAVAVAVSLGVFTIIRIRNAPERKDRASRFYGSHTGGAWLILAMIFN
VVWTMFFFRGASSASGNFPYDNGAYVSLGVGNLLEPLGHSTTEVLETVGLLLHIGVMLVFLSIVLYSKHLHIFVAPLNVS
AKRLPDALGPLLPMESAGKPIDFEDPAEDDTFGRGKIGDFTWKGMLDFATCTECGRCQSQCPAWNTGKPLSPKLVIMNLR
DNLFEEAPYILAGTEHEGARPLVGPEDDGGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVDMRRYQVMIESAFPTELGG
LFKNLETKGNPWGQNNAERLTWTKDLGFDVPVFDGELAEDVEYVYWVGCAGAFDDQARKTVRATAELLHIAGVRYVVLGK
EESCTGDPARRAGNEFLFQMMAQQTAETLNAVFEGREPRLRKIVTTCPHCLNTLSREYPQLDGHYEVVHHTQLLNRLVRG
GQLTPVKPVEDGPKVTYHDPCYLGRHNKVYTPPRELVGATGAQLAEMPRHADRALCCGAGGARMWMEEQIGKRINLERVD
EAIATDAETIVTGCPFCRVMLTDGLVQRQSEQKAENVDVRDVAQLLLERVKAADTSAPTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fadF YP_005682164.1 Protein fadF Not tested PiCp 7 Protein 5e-143 46
fadF YP_005684256.1 Protein fadF Not tested PiCp 7 Protein 5e-143 46
fadF YP_005686348.1 Protein fadF Not tested PiCp 7 Protein 5e-143 46
cpfrc_01915 YP_003784315.1 hypothetical protein Not tested PiCp 7 Protein 5e-143 46