Gene Information

Name : RAM_21935 (RAM_21935)
Accession : YP_005532324.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_017186
Putative virulence/resistance : Resistance
Product : sulfonate/nitrate/taurine ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4709382 - 4710155 bp
Length : 774 bp
Strand : -
Note : COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component

DNA sequence : 
GTGATCGGCATCCGCTCGGTGACCAAGACCTTCGGCGCGCTGACCGCCCTCGACGACGTCTCGCTCGACATCGCCGACGG
CACGTTCCTCTCGCTGGTCGGGCCCAGCGGCTCGGGCAAGTCGACGCTGCTCGACCTGCTGGCCGGGCTCACCACGCCGA
CGTCGGGCGAGGTGGTCATCGACGGCGAGCCGGTGCGCGGCCCCGGCCTCGACCGCGGGGTCGTGTTCCAGCAGTACGCG
CTGTTCCCGTGGCGCACGGCCCGCGCCAACGTCGAATTCGGCCTCGAAGGCGGGCCGCTCGGAAAGCGGCAGCGGGCCGA
GCGGGCCCGCGAATACCTCGCCCTGGTCGGGCTGTCCGGCTTCGAGGACCGCTACCCGCACGAGCTTTCCGGCGGGATGA
AGCAGCGCGTCGCGATCGCCCGCAGCCTCGCCTACGACCCGGCCGTGCTGCTGATGGACGAGCCGTTCGCCGCGCTCGAC
GCGCAGACCCGCGAGCAGCTGCAGGAGGAGCTGCTGCGGATCTGGCGCCGCACCGGCAAGACGATCGTCTTCATCACCCA
CGGCATCGACGAGGCCGTCTACCTGGGACAGCGGATCGCGGTGCTGACGTCGCGGCCCGGGCGGCTCAAGGCCGTCGTCG
ACGTCGACCTCGGCGACCGCACCGGCGACGTGCGCTCCGGGCCGGAGTTCGGACGGCAGCGCCACCGGCTCTGGGAACTG
CTGCACGACGAGGTCCGCAAGGCGGCCGAACACGAACGGAGCGCGGCCCGATGA

Protein sequence : 
MIGIRSVTKTFGALTALDDVSLDIADGTFLSLVGPSGSGKSTLLDLLAGLTTPTSGEVVIDGEPVRGPGLDRGVVFQQYA
LFPWRTARANVEFGLEGGPLGKRQRAERAREYLALVGLSGFEDRYPHELSGGMKQRVAIARSLAYDPAVLLMDEPFAALD
AQTREQLQEELLRIWRRTGKTIVFITHGIDEAVYLGQRIAVLTSRPGRLKAVVDVDLGDRTGDVRSGPEFGRQRHRLWEL
LHDEVRKAAEHERSAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-43 48
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-29 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RAM_21935 YP_005532324.1 sulfonate/nitrate/taurine ABC transporter ATPase BAC0600 Protein 2e-22 42