Gene Information

Name : RAM_10065 (RAM_10065)
Accession : YP_005529960.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_017186
Putative virulence/resistance : Virulence
Product : iron ABC transporter periplasmic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2121111 - 2121908 bp
Length : 798 bp
Strand : +
Note : COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component

DNA sequence : 
GTGACCCACGCGCTCGGCAAGACCAAGCTCGACAAGAAGCCCACGCGGGTCGTCGTGCTCGACAGCGGCGAGCTCGACGA
CGTCCTCGCGCTCGGCGTCACCCCGGTCGGCATGGCGACCACGGCCGGGCAGAGCGGCGTGCCGTCCTACCTCGCCGACC
GCGTCAAGGGCATCCCGGCGGTCGGGGACATCAACAACCTCGACCTCGAGCGGATCGCGGCGCTGACGCCGGATCTGATC
GTCGGCAGCAAGCTGCGCGCCCGCAGCTGTCGGAAGATCGCGCCGACGGTGTTCGGCATCCGGCCCGGGTTCCCGTGGAA
GGAGAACCTGCTGCTGGTCGGGGCTTCGCTCGGTGACGAGACGAAGGCGGTCGGGCTGCTGAACGACTACCAGAAGCGGG
CGAACGAGGTGAAGGCCGCGGTCAAGGGCGCGCCGAAGATCTCGCTGCTGCGGTTCCTGTCCGGCAACATCCGCCTCTAC
GGCAACCTCTCCTTCATCGGCGTCATCCTCGAGGACGTCGGGCTCGCGCGGCCGGCGCACCAGAACATCGACGAACTCGC
CGCCCAGATCTCCAAGGAGCGCATCGACGAGGCCGACGCCGACTGGATCTTCTACTCCAGCTACGGCGCCGGCCCGAGCG
CGGACGAGAAGGCCGTCACGAGCAGCGGGCTGTGGGCCGGCCTCGGCGCGGTCAAGGCGCAGCACGCGATCCCGGTGGCC
GACGAGGTGTGGTTCCTCGGTCTCGGCCCGATCGGGGCGATGAAGGTCCTCGACGACCTGAAGAAGTACCTCGGCTGA

Protein sequence : 
MTHALGKTKLDKKPTRVVVLDSGELDDVLALGVTPVGMATTAGQSGVPSYLADRVKGIPAVGDINNLDLERIAALTPDLI
VGSKLRARSCRKIAPTVFGIRPGFPWKENLLLVGASLGDETKAVGLLNDYQKRANEVKAAVKGAPKISLLRFLSGNIRLY
GNLSFIGVILEDVGLARPAHQNIDELAAQISKERIDEADADWIFYSSYGAGPSADEKAVTSSGLWAGLGAVKAQHAIPVA
DEVWFLGLGPIGAMKVLDDLKKYLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 5e-73 56
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 9e-73 56
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 9e-73 56
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 9e-73 56