Gene Information

Name : RAM_07040 (RAM_07040)
Accession : YP_005529357.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_017186
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1480170 - 1480910 bp
Length : 741 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGACCACAGCGAGCGCGTACGCGCTGGAGCTGAGCGGGGTGCGGAAGGTGTACGGCTCCGGCGACGGCGCGGTCACCGC
GCTGGACGGGGTGTCGGCGGGGGTGGCGCGGGGGTCGTTCACCGCCGTGATGGGCCCGTCCGGCTCGGGCAAGAGCACTT
TCCTGCACTGCGCGGCCGGCCTCGACCGGCCGACGTCGGGGCGGGTGCTGCTCGGCGGCACCGAGATCGGCAGGCTGAAG
GAACGCGAGCTGACGGAGCTGCGGCGCACCCGGATCGGGTTCGTCTTCCAGGCCTACAACCTGCTGTCGTCGCTGAACGT
GCTGCAGAACATCACGCTGCCGCTGCGGCTCGCCGGGCGGAAGCCGGACCCGCAGTGGCTGCGGGAGATCGTCGACGGCG
TGGGGATCGCGAACCGGCTGGAACACCGCCCGGCGGAGCTGTCCGGCGGGCAGCAGCAGCGCGTCGCGATCGCGCGGGCG
CTCGTCACCCGGCCCGAGGTGGTGCTGGCCGACGAGCCGACCGGCGCGCTGGACACCCGCACCGGGCGGCAGGTGCTGGA
CCTGCTCCGCGCGATCGTCGAGCAGATGGGGCAGACCGTGCTGATGGTGACCCACGACCCGGTCGCGGCGTCGGCCGCGC
ACGGCGTGCTCTTCCTGGCCGACGGCAAGCTGGCCGGGCACCTCCCGCACCCCACCCCCGAGCGGGTGGCGGAGCGGATG
ACGCACCTCGGGGAGTGGTGA

Protein sequence :
MTTASAYALELSGVRKVYGSGDGAVTALDGVSAGVARGSFTAVMGPSGSGKSTFLHCAAGLDRPTSGRVLLGGTEIGRLK
ERELTELRRTRIGFVFQAYNLLSSLNVLQNITLPLRLAGRKPDPQWLREIVDGVGIANRLEHRPAELSGGQQQRVAIARA
LVTRPEVVLADEPTGALDTRTGRQVLDLLRAIVEQMGQTVLMVTHDPVAASAAHGVLFLADGKLAGHLPHPTPERVAERM
THLGEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-37 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-37 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-37 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RAM_07040 YP_005529357.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-37 49
RAM_07040 YP_005529357.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 3e-43 47
RAM_07040 YP_005529357.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-36 47
RAM_07040 YP_005529357.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 5e-41 47