Gene Information

Name : CDBI1_02240 (CDBI1_02240)
Accession : YP_006197614.1
Strain :
Genome accession: NC_017179
Putative virulence/resistance : Virulence
Product : lantibiotic ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 516892 - 517596 bp
Length : 705 bp
Strand : +
Note : 'COG1131 ABC-type multidrug transport system, ATPase component'

DNA sequence :
ATGAAAGATTTAATTCTTGAAACAAAAAACTTATCAAAAAGATATGGAGAACAAATGGCAGTTAACAATGTTTCTCTACA
AATTGAACGAAATAGTATATATGGACTTTTAGGACCAAATGGAGCAGGAAAGTCCACAACACTTAAAATGCTTGTTGGTC
TTCTTCGCCCAACAGATGGTCGTATTATTTTTGATAGAAAGCCTTGGAAACGAGAATCTCTTGCAAAAATAGGTTCTTTA
ATAGAATCCCCTGCATTGTATGGAAACCTTACAGCAGAGGAAAATTTGTTAGTACATACAAAAATATTGGGAATACCTAA
AGATAAAATTTATGAAGTGTTGGAAATAGTAAATTTGAAAAATACAGGTAAAAAGAGAGCTTCACAATTTTCTATGGGTA
TGAAAAAAAGGTTAGGAATAGCTATTGCACTTTTGAGTGACCCAGAGTTGTTAATACTAGATGAACCAACCAATGGTCTT
GACCCCTTTGGCATTCAAGAATTGCGTGAATTGATTGCTTCTTTTCCAAAAAAAGGTATAACTGTAATTCTTTCTAGCCA
TATTCTATCAGAGGTTGCTCAAGTTGTAGATAATATAGGAATTATAAATGGAGGACGACTACTATTTCAAGGAATGCCTG
ACCCTAATGAAAATCTAGAAGAATTTTTTACAGATGTTATTCTTAAAGGAGGACAAAACAGATGA

Protein sequence :
MKDLILETKNLSKRYGEQMAVNNVSLQIERNSIYGLLGPNGAGKSTTLKMLVGLLRPTDGRIIFDRKPWKRESLAKIGSL
IESPALYGNLTAEENLLVHTKILGIPKDKIYEVLEIVNLKNTGKKRASQFSMGMKKRLGIAIALLSDPELLILDEPTNGL
DPFGIQELRELIASFPKKGITVILSSHILSEVAQVVDNIGIINGGRLLFQGMPDPNENLEEFFTDVILKGGQNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 8e-47 53
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 8e-40 49
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 8e-40 49
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 8e-40 49
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 7e-40 49
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 1e-32 45
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 3e-36 43
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-36 41
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 3e-29 41