Gene Information

Name : CDBI1_17925 (CDBI1_17925)
Accession : YP_006200706.1
Strain :
Genome accession: NC_017179
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4062538 - 4063155 bp
Length : 618 bp
Strand : -
Note : 'COG1136 ABC-type antimicrobial peptide transport system, ATPase component'

DNA sequence : 
ATGATTTCATTAATAAATATATCTAAAAAATTTAAAGATAAATCTATAATAGACAAATTTAACCTAGAAATTTCTAAGGG
CGAGTTTGTAGCGATAACAGGAAATAGTGGTTCAGGTAAGACAACTTTACTTAATATAATGGGATTATTAGAAAAACCTA
ATTCTGGTGATATTATAATAAATAATATAAAAAATCCAAATAGTAAACAGATAAGAATTTTACAAAGGGATTTTTATGGC
TATCTATTTCAAAATTATGCTTTAATTGAGAATGAAAATGTTGAAAATAACTTGAAAATTGCTTTAAAGTATCAAAAAAA
TATCAACCATAATGAAAAAATAAATTACGCACTTGAGTCTGTAGGTCTTAGAAAATACAATAAAAAAAAGATATACGAAT
TGAGTGGAGGAGAACAACAAAGGGTAGCATTAGCAAGAGTAATATTAAAAGAATGTGAAGTAATATTTGCAGATGAACCT
ACAGGTAATTTAGATAAAAAAAATAGAGACATAGTATTTGATATACTTAAAAATCTAAATAAGAATGGTAAAACTATCGT
ATTTGTAACTCATGATTTAGAGTTATCGGAGCAGGCAGATAGAGTTATAAAATTGTAA

Protein sequence : 
MISLINISKKFKDKSIIDKFNLEISKGEFVAITGNSGSGKTTLLNIMGLLEKPNSGDIIINNIKNPNSKQIRILQRDFYG
YLFQNYALIENENVENNLKIALKYQKNINHNEKINYALESVGLRKYNKKKIYELSGGEQQRVALARVILKECEVIFADEP
TGNLDKKNRDIVFDILKNLNKNGKTIVFVTHDLELSEQADRVIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-33 53
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDBI1_17925 YP_006200706.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-31 48
CDBI1_17925 YP_006200706.1 ABC transporter ATP-binding protein CP003583.1.gene613.p Protein 4e-27 41
CDBI1_17925 YP_006200706.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDBI1_17925 YP_006200706.1 ABC transporter ATP-binding protein VFG0869 Protein 8e-25 41