Gene Information

Name : CDBI1_14735 (CDBI1_14735)
Accession : YP_006200085.1
Strain :
Genome accession: NC_017179
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3357861 - 3359198 bp
Length : 1338 bp
Strand : -
Note : COG2115 Xylose isomerase

DNA sequence :
ATGAGTGAAATATTTAAAGGAATAGGACAGATAAAATTTGAAGGAGTAAAATCTGACAATGAATTAGCATTTAGATACTA
CAATCCTGAACAAGTGGTAGGTAATAAGACTATGAAAGAACACTTAAGATTTGCAATGAGCTATTGGCATACTTTATGTG
GAGAGGGTAATGACCCATTTGGAGTAGGCACAGTAGAGAGACCTTGGAATAATGTAACAGACCCAATTGAGATAGCAAAG
ATTAAAGTTGATGCAGGATTTGAATTTATGTCTAAGATGGGAATTGAGTATTTCTGTTTTCATGACAGAGATATAGCTCC
AGAAGGAAGAGATTTAGAAGAGACAAATAAGATATTAGATGAAATAGTTGAGTATATAAAAGTTAATATGGAAAAGACAG
GTATAAAGTTATTATGGGGAACTGCCAATATGTTTGGAAATCCAAGATTTGTTCATGGTGCATCTACAACATGTAATGCA
GATGTATATGCATATGCAGCAGCTCAGGTTAAAAAAGCTATGGAAATAACTAAGTACTTAGGAGGAGAAAATTTTGTATT
CTGGGGTGGAAGAGAAGGTTATGAAACTTTACTTAACACTAATACAGAACTTGAAATGGATAACTTTGCAAGATTCTTAC
AAATGGCTGTAGATTATGCTAAGGAAATAGGATTCACTGGCCAATTCTTAATAGAGCCTAAGCCAAAAGAGCCTACTAAA
CATCAATACGATTTTGATACTGCTACTGTTTTAGGATTTTTAAGAAAGTATAATCTGGATAAATACTTCAAAATGAATAT
AGAAGCAAACCATGCAACACTTGCAGGACATACTTTCCAACATGAATTAAATATAGCAAGAATAAACAATGTTTTAGGTA
GTATAGATGCAAATCAAGGAGACCTATTATTAGGTTGGGATACAGACCAATTTCCAACAAATATATATGATGCAACACTT
GCTATGTATGAAGTGTTAAAGCAAGGTGGAATAGCACCAGGAGGATTTAACTTTGACTCTAAAGTAAGAAGAGCATCTTT
TGAGGTAGAAGACTTATTCCTAGCTTATATTGCAGGAATGGATACATTTGCAAAGGGATTATTAATAGCTCATAAATTAT
TAGAAGATGAGGTATTTGAAAACTTTACTAAAGAAAGATATGCAAGTTTTAGTGAAGGTATAGGTAAGGATATAGTAGAA
GGTAAGGTTGGATTTAAAGAGTTAGAATCTTATGCACTGCAAATGCCAGTTATAAAGAATAAGTCTGGAAGACAAGAAAT
GCTAGAAGCTATACTTAACAGATATATATATGAAGTAGATACAATTTCTAATAAGTAA

Protein sequence :
MSEIFKGIGQIKFEGVKSDNELAFRYYNPEQVVGNKTMKEHLRFAMSYWHTLCGEGNDPFGVGTVERPWNNVTDPIEIAK
IKVDAGFEFMSKMGIEYFCFHDRDIAPEGRDLEETNKILDEIVEYIKVNMEKTGIKLLWGTANMFGNPRFVHGASTTCNA
DVYAYAAAQVKKAMEITKYLGGENFVFWGGREGYETLLNTNTELEMDNFARFLQMAVDYAKEIGFTGQFLIEPKPKEPTK
HQYDFDTATVLGFLRKYNLDKYFKMNIEANHATLAGHTFQHELNIARINNVLGSIDANQGDLLLGWDTDQFPTNIYDATL
AMYEVLKQGGIAPGGFNFDSKVRRASFEVEDLFLAYIAGMDTFAKGLLIAHKLLEDEVFENFTKERYASFSEGIGKDIVE
GKVGFKELESYALQMPVIKNKSGRQEMLEAILNRYIYEVDTISNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 4e-119 61
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 3e-119 61