Gene Information

Name : CDBI1_13890 (CDBI1_13890)
Accession : YP_006199916.1
Strain :
Genome accession: NC_017179
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.11
Position : 3161228 - 3162499 bp
Length : 1272 bp
Strand : -
Note : COG0172 Seryl-tRNA synthetase

DNA sequence :
ATGCTTGATATAAAAAGAATAAGAGAAAATTTAGATTGTATAAAAAAAGCAATGGAAAGAAGGGGCGAAAAAGACTTTAA
CCTTGATGAAGTAGTTAAGTTAGATGATGAAAGAAGAAAGATTCTTCAAGAAGTTGAAGTTATGAAACATAAATTAAATA
CAGCATCTAAAAATATACCAAATCTTATAAAAGAAGGTAAAGATGTAGAAAATGAAAAGATTAAACTAAAAGAGTTATCT
GATAAAATTAAGGTAATAGACCAAAATCTTAAAGAAGTAGAAGATAAGATGGAATACCTATTAATGAGAATACCAAATGT
ACCACATCCAGAAGTACCACAAGGTGAAACTGATGAAGATAATGTTGAGGTAAGAACTTGGGGAAAGACTACTACCTTTG
ATTTTGAATCTAAGGCTCATTGGGAAATTGGAACAGAATTAGGTATACTTGATTTTGAAACAGCGAGTAAAATAACTGGT
TCAAGATTCACTCTTTACAAAGGATTGGGTGCTAGATTAGAGAGAGCATTATTAAATTTTTACTTAGACACGAATACAAA
AGTAAATGGATATACAGAAGTCATTCCACCATTTATGGCAAATAGAAATAGTTTTTTAGGTACAGGACAGTTACCTAAGT
TTGAAGAAGATATGTTTAAAATAGAAGGTCTGGACTATTTTATGATTCCAACATCAGAAGTTCCTTTAACTAATATACAT
GCTAATGAAATACTTAAATTTGAACAATTACCAATAAATTATACAGCTTATACTCCATGTTTTAGGTCAGAAGCTGGTTC
TGCTGGAAGAGATACAAGAGGTTTAGTAAGACAGCATCAGTTTAACAAAGTAGAAATGGTTAAAATAGTTGCACCAGAAG
AATCTTACAATGAGTTAGAAAAGCTTACTAACAATGCGGAAACTATGCTACAATTATTGAATCTGCCTTATAGAGTAGTA
AAGATATGTACAGGTGATTTAGGATTTACGGCTTCTTTTAAATATGATGTAGAAGTTTGGATGCCAAGTTACAATAGGTA
TGTTGAGATTTCATCTTGTTCAAACTGCGAAGATTTCCAAGCTAGAAGAGCAGGAATAAGATTTAAAAGAGATAAAGATT
CTAAAGCTGAATATGTACACACATTAAATGGCTCTGGGTTAGCTATTGGAAGAAGTGTTGCAGCTATATTAGAAAATTAT
CAACAAGAAGATGGTTCTGTGGTTGTTCCTGAAGTTTTAAGACCATATATGGGAGTTTCTGTTATTAAATAA

Protein sequence :
MLDIKRIRENLDCIKKAMERRGEKDFNLDEVVKLDDERRKILQEVEVMKHKLNTASKNIPNLIKEGKDVENEKIKLKELS
DKIKVIDQNLKEVEDKMEYLLMRIPNVPHPEVPQGETDEDNVEVRTWGKTTTFDFESKAHWEIGTELGILDFETASKITG
SRFTLYKGLGARLERALLNFYLDTNTKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGLDYFMIPTSEVPLTNIH
ANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKIVAPEESYNELEKLTNNAETMLQLLNLPYRVV
KICTGDLGFTASFKYDVEVWMPSYNRYVEISSCSNCEDFQARRAGIRFKRDKDSKAEYVHTLNGSGLAIGRSVAAILENY
QQEDGSVVVPEVLRPYMGVSVIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 1e-113 56