Gene Information

Name : CDBI1_12430 (CDBI1_12430)
Accession : YP_006199626.1
Strain :
Genome accession: NC_017179
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2793850 - 2795907 bp
Length : 2058 bp
Strand : -
Note : COG1200 RecG-like helicase

DNA sequence :
TTGGATTTATATAAAGATGTTCAATATGTTAAGGGAATAGGACCTAAAAAAGCAGATAAATTAAATAAACTGGGTATATT
TACACTAAAAGACCTATTGTATTATTTTCCAAGACAATTTGAAGATAGAAATAATCTAAAGAAAATAGCACAATTAGAAG
ATGGTGAGAAAGTTACGATAAAAGCAGTAATATCAAGTATAAATACATTTAGCCCAAAAGAAGGTATGACTTTAACAAAG
ATTGATGTAAAAGATGAGACAGGCTCGGCTAAATTAGTGTTTTTTAATAAAAGTTATATAAAAAATACTTTTCGTCCAGG
AGATTCAATATTAGTTTTTGGGAAGGTTAAGAAAAAATTTAATAACTTAGAACTTACATCATGTGAATTAGAATATCTTA
CTAATTCACCTAAGAATACATGTAGATTTATGCCTGTGTACCAGCTTACATACGGTGTTACAAATAAAGAAATTATGAGT
ATAATTAGAACAGTACTTGAAGATAAAGAATTAATTATACAAGAATATATGCCACAAAGAATTATAGAAAAATATAGGCT
ATGTAGTATAGATTTTGCAGTTAGAAACATACATTCACCAAGTAGTAAGGAATCATTAAAAATAGCTTTATATAGAATTG
TATTTGAAGAATTACTTATACTACAACTAGGGTTGTTTGTATTTAAAAGTGGCAGAAATAAAGAAGATGGAATAAAGTTT
GAAACAAGTAAAGACTTAAAAAAAATAATAAGTGCTTTACCATTTAAACTGACTAAAGCTCAAAACAGGGCATTAGATGA
AATTATACAAGATATGAATTTAGAGAAAATAATGAATAGATTGGTACAAGGTGATGTAGGGAGTGGTAAAACAGTAGTAG
CTCTCTTAGCACTTGCAAATTGTGTTTTAAATGGTTATCAGGGCGCTTTGATGGCACCTACAGAGATATTAGCAGGGCAA
CATTACATTTCACTTACTGAGTCTCTAAAAGATTTTGGAATAAATGTAGGTCTATTAATAGGTAGTCTTACAAAAAAACA
AAAGGATACAGTATTGGAACAAATAAGGAATAATGAGATTGATATATTAATAGGTACACATGCACTAATTGAAGATAAGG
TTGAATTTAATAATATTGGTTTAGTTATAACAGATGAACAGCATAGATTTGGTGTTATGCAAAGGAGCAAACTTTCATTG
AAAGGAGCAAATCCTGATATATTAGTAATGACAGCAACACCAATACCAAGAACTTTAGCACTTATACTCTATGGAGATTT
AGATATTTCTATTATAGATGAACTTCCTCCAGGAAGACAGCCAATAGAAACAATTGCTATTGAAAAAAGTAAGCGAGATA
GAGCATATAATAACCTTGTAAGAAGAGAGGTTGAATCAGGAAGACAAGTGTACATTGTATGTCCTTTGGTAGAAGAAAGT
GAAGCTATAGAAGCTAAATCAGCAGTTGAACTTGTAGAGGAATTAAGAGCTGAATATTTCCACGATTTAAGGCTTGGATT
GCTTCATGGTAAAATGAAATCGAGTGAAAAAGACGAAGTAATGGAACGTTTTAAAAATAAAGAAATAGATATTTTAGTTT
CAACAACAGTTATAGAAGTTGGTGTCAATGTCCCAAATGCAACATTAATGATAATAGAAAATGCAGAAAGATTTGGACTT
GCACAATTACATCAGCTTAGAGGGCGAGTTGGAAGAGGTAGTCATAAATCGTATTGTGTACTAATTTATGATTCTAAAAC
AGATGTATGTAGACAAAGAATGGCTATAATGGAAGAGACCAATGATGGTTTTAAGATTTCAGAGAAGGATTTAGAAATAA
GAGGACCTGGAGAATTTTTTGGGACAAGGCAACATGGTCTTCCAGAACTTAAAGTAGCAAACTTATTTAAACATATAAAA
ATATTGAAGTTAGCACAACAAGAAGCTCGATATATATTGGGTGAAGATAATAATCTACAATTGAAAGAAAACATGGCACT
CAAAAAAGAAATTATAGATAAATTTAAAGATACATTGAAAGAAATTTCATTAAATTAA

Protein sequence :
MDLYKDVQYVKGIGPKKADKLNKLGIFTLKDLLYYFPRQFEDRNNLKKIAQLEDGEKVTIKAVISSINTFSPKEGMTLTK
IDVKDETGSAKLVFFNKSYIKNTFRPGDSILVFGKVKKKFNNLELTSCELEYLTNSPKNTCRFMPVYQLTYGVTNKEIMS
IIRTVLEDKELIIQEYMPQRIIEKYRLCSIDFAVRNIHSPSSKESLKIALYRIVFEELLILQLGLFVFKSGRNKEDGIKF
ETSKDLKKIISALPFKLTKAQNRALDEIIQDMNLEKIMNRLVQGDVGSGKTVVALLALANCVLNGYQGALMAPTEILAGQ
HYISLTESLKDFGINVGLLIGSLTKKQKDTVLEQIRNNEIDILIGTHALIEDKVEFNNIGLVITDEQHRFGVMQRSKLSL
KGANPDILVMTATPIPRTLALILYGDLDISIIDELPPGRQPIETIAIEKSKRDRAYNNLVRREVESGRQVYIVCPLVEES
EAIEAKSAVELVEELRAEYFHDLRLGLLHGKMKSSEKDEVMERFKNKEIDILVSTTVIEVGVNVPNATLMIIENAERFGL
AQLHQLRGRVGRGSHKSYCVLIYDSKTDVCRQRMAIMEETNDGFKISEKDLEIRGPGEFFGTRQHGLPELKVANLFKHIK
ILKLAQQEARYILGEDNNLQLKENMALKKEIIDKFKDTLKEISLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 8e-97 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDBI1_12430 YP_006199626.1 ATP-dependent DNA helicase RecG BAC0356 Protein 1e-111 41