Gene Information

Name : CDBI1_12305 (CDBI1_12305)
Accession : YP_006199603.1
Strain :
Genome accession: NC_017179
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2764439 - 2765122 bp
Length : 684 bp
Strand : -
Note : 'COG1136 ABC-type antimicrobial peptide transport system, ATPase component'

DNA sequence :
ATGAAAATACTATATACTGAAAATTTATCAAAGCATTATGGAAAAGGAGAAAACTTAGTAAGAGCTTTGGACAATGTTAA
CTTAGAAATAAATGAAGGTGAATTTGTTGCAATAATAGGAAAATCAGGTTCTGGAAAAAGTACACTTTTACATATGATTG
GAGGTCTTGATATACCTACATCTGGGAAGGTGTATATAGATAATAAAAATATATTTACATTAAAAGAAGAAGAACTAGCT
GTGTTTAGAAGAAGAAAAATAGGGTTTATATTTCAAAGCTATAATTTAATTCCATCTCTTAATGTATGGGAAAATGTAGT
GTTGCCAATCGGTCTAGATGGTAGAGAAGTAGATGAATCTTTTATAAAAGAACTTTTGAAATCATTAGGACTTGAAAATA
AACATGACGTTTTACCAAATACATTATCAGGTGGTCAACAACAAAGGGTGGCAATAGCAAGAGCATTAGCTACAAGACCA
GCTATAATACTTGCTGATGAACCAACTGGAAACCTAGATTCTAAAACATCTGATGAGGTTATGAGTATATTAAAATCTAT
GTCTAAGAAGTACAGTCAAACTCTAGTTATGATAACTCATGATGACAGTATAGCCCAAATGGCTGATAGAGTTATATTCA
TAGAAGATGGCAGGGTGTCAAAGGTTGGTGATAAAAATGATTAA

Protein sequence :
MKILYTENLSKHYGKGENLVRALDNVNLEINEGEFVAIIGKSGSGKSTLLHMIGGLDIPTSGKVYIDNKNIFTLKEEELA
VFRRRKIGFIFQSYNLIPSLNVWENVVLPIGLDGREVDESFIKELLKSLGLENKHDVLPNTLSGGQQQRVAIARALATRP
AIILADEPTGNLDSKTSDEVMSILKSMSKKYSQTLVMITHDDSIAQMADRVIFIEDGRVSKVGDKND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 49
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-40 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-40 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-40 47
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-37 41
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 9e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDBI1_12305 YP_006199603.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-68 66
CDBI1_12305 YP_006199603.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-63 58
CDBI1_12305 YP_006199603.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-41 47
CDBI1_12305 YP_006199603.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-36 45
CDBI1_12305 YP_006199603.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-36 42