Gene Information

Name : CDBI1_00795 (CDBI1_00795)
Accession : YP_006197327.1
Strain :
Genome accession: NC_017179
Putative virulence/resistance : Unknown
Product : RNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 200983 - 203124 bp
Length : 2142 bp
Strand : +
Note : COG2183 Transcriptional accessory protein

DNA sequence :
TTGGATATAAATCAAATCTTAAAAAAAGAGTTTAATCTTAGAGATGAACAAATAAATAATACATTAAAACTTATTGATGA
AGGAAATACAATACCATTTATAGCTAGATATAGAAAAGAAATGACTGGCGAAATGAGTGATGTTACACTAAGAGAATTTT
ATGAAAAATTAATGTATTTGAGAAATCTTCAAAGTAGAAAAGATGATGTAGTTAGACTAATAGATGAACAAGGGAAATTA
ACAGATGAAATAACACAAAATATAGAAAAAGCAAAAACATTACAAGAAGTAGAAGATATATATGCTCCATATAAACAAAA
GAAAAGAACTAGAGCAACAATAGCAAAAGAAAAAGGATTAGAAAATTTAGCATTGTCAATACTAGAGAATAATTTAGATA
ATATAGAAATAGAGGCAAAGAATTATCTTGATGAAGAGAAAGAAGTTCTTTCTATTGAAGATGCTCTAAAAGGTGCTAGA
GATATAATTGCAGAACTAGTCTCAGATGATGCTAAGATTAGAAAGTATATAAGAGAATTAGCTTTAAGAGAAGGTATGAT
AGTTAGCAAAAGTGCTACTGATGAGAAATCGGTTTATGATATGTATTATGATTATAACGAAGCAGTAAAAAGTATGGCTC
CACATAGAGTTTTGGCAATAAACAGAGGAGAAAAAGAAAGCTTCCTAAAGGTTAAGTTAGAAATAAATAATGATAAAGTT
TTAAATTACATAATAAACGAATATGTAAATGATAAAAATTTCAAAAATAAAGAAGAAATCGTAAGTTCAATAGAAGATTC
TTATAAAAGATTAATTTTCCCATCAATAGAAAGAGAAATAAGAAATCATTTAACAGAAATAGCTCAAGAAAGAGCTATAA
GTGTATTTGGAAAGAATGTTAAAAGTTTATTGCTTCAACCACCAGTTAAAGACAAAGTAGTTATGGGATTTGACCCTGCA
TTTAGAACTGGATGTAAAATAGCTGTAGTAGATAAAAATGGTAAACTACTAGATTATACAACAGTATATCCAACAGACCC
TCAAAATGATGTAGAGGGAGCAAAGAAAGTTTTAAAAGGATTGATTGAAAAATACGATATAGATATAATTTCAATTGGAA
ATGGTACTGCATCTAGAGAATCAGAAACTTTTGTATCAGAAATGATAAAAGAAATAGATAGCGAAGTGCAGTATGTGATA
GTTAGTGAAGCAGGAGCATCTGTTTATTCAGCATCTGAACTTGCAAATGAGGAACATCCAGATATAAATGTATCAATAAG
AGGAGCTATATCTATAGCTAGAAGATTACAAGACCCATTAGCAGAGCTTGTAAAAATAGACCCTAAAAGTATTGGTGTTG
GTCAATATCAGCATGATTTAAACAAAAAGAGATTAGAAGAAGTGCTAGATGGAGTTGTTGAAGATTCTGTAAATAGTGTT
GGAGTAGATTTAAATACCGCATCATACTCCCTACTAGAACATGTTGCAGGAATAAGTAAAGCTATAGCAAAAAATATAAT
AGCATATAGAGAAGAAAATGGAGATTTTACATCAAGAGCACAATTGAAAAAAGTAAAAAGACTAGGACCTCAAGCATTTA
CTCAATGTGCTGGATTTATGAGAATCTTAGAGGGTAAAAATCCACTAGATAATACAGGTGTGCATCCTGAAAGTTATGAT
ATATGTAAAAAAATGATTGAGATAATTGGATATTCTTTAGATGATGTAAAGAATAAGAATATAGGTGAAATAGATGAAAA
AATAAAAGAAATTGGCTTGAGGGAATTAAGTGAAAAACTGGAAGTAGGACAAGTTACGTTAAAAGATATCATAGCTGAAA
TCAAAAAACCAGGAAGAGACCCAAGAGAAGAAGGTATAAAACCTATACTTAGAACTGATGTCTTAAAAATTGAAGATATA
CAAGAGGGTATGACTTTAAAAGGTACAATAAGAAATGTTGTAGACTTTGGTGCATTTGTAGATATTGGAATAAAAAATGA
CGGATTAGTTCATAAATCAGAAATGAGTAATAGTTTTGTGAAAGACCCTATGAGTATTGTTACAGTAGGTGATATAGTAG
ATGTAAAAGTCATTGGAATTGACTTAAACAAAAAAAGAGTTGCCTTATCAATGAAAAAATAG

Protein sequence :
MDINQILKKEFNLRDEQINNTLKLIDEGNTIPFIARYRKEMTGEMSDVTLREFYEKLMYLRNLQSRKDDVVRLIDEQGKL
TDEITQNIEKAKTLQEVEDIYAPYKQKKRTRATIAKEKGLENLALSILENNLDNIEIEAKNYLDEEKEVLSIEDALKGAR
DIIAELVSDDAKIRKYIRELALREGMIVSKSATDEKSVYDMYYDYNEAVKSMAPHRVLAINRGEKESFLKVKLEINNDKV
LNYIINEYVNDKNFKNKEEIVSSIEDSYKRLIFPSIEREIRNHLTEIAQERAISVFGKNVKSLLLQPPVKDKVVMGFDPA
FRTGCKIAVVDKNGKLLDYTTVYPTDPQNDVEGAKKVLKGLIEKYDIDIISIGNGTASRESETFVSEMIKEIDSEVQYVI
VSEAGASVYSASELANEEHPDINVSIRGAISIARRLQDPLAELVKIDPKSIGVGQYQHDLNKKRLEEVLDGVVEDSVNSV
GVDLNTASYSLLEHVAGISKAIAKNIIAYREENGDFTSRAQLKKVKRLGPQAFTQCAGFMRILEGKNPLDNTGVHPESYD
ICKKMIEIIGYSLDDVKNKNIGEIDEKIKEIGLRELSEKLEVGQVTLKDIIAEIKKPGRDPREEGIKPILRTDVLKIEDI
QEGMTLKGTIRNVVDFGAFVDIGIKNDGLVHKSEMSNSFVKDPMSIVTVGDIVDVKVIGIDLNKKRVALSMKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 6e-134 44