Gene Information

Name : CDBI1_09470 (CDBI1_09470)
Accession : YP_006199044.1
Strain :
Genome accession: NC_017179
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2121155 - 2121841 bp
Length : 687 bp
Strand : -
Note : 'COG1136 ABC-type antimicrobial peptide transport system, ATPase component'

DNA sequence : 
ATGAGTATATTAGTGACGAATAATTTAGTGAAACACTATGGAAAAGGTGAGACTAAAGTAAAAGCCTTAAATGGAGTAAG
TATAGAAATTGAACGAGATACATTTACTGCTATAGTTGGAACTTCTGGTTCTGGAAAAAGCACATTGTTAAATATTATAG
GTGGATTAGATAATCCAACCTCAGGTGATGTAATAATTAAAGGAAAGAACATATCTAAAATAGGAAAAAAAGATTTGACA
GTATTTAGAAGAAGAAATATAGGATTTATATTTCAAAACTACAGTTTAATGCCCGTATTAAACACTTATGATAATATAGC
TCTTCCTGTTACATTAGATAAAGGAAACCATATAGACCATGAATATATTGAAATGCTGATGAAGACATTGGGAATTTGGG
ATAAGCGTTTAAAATTTCCAAGCGAACTATCTGGTGGTCAACAACAGAGGGTAGCAATTGCTAGAGCTTTGGCAAATAAA
CCTGCACTTATATTAGCAGATGAACCAACAGGAAATCTCGATAGTAAAACTACAATGGAAGTGGTATGTTTATTAAAAGA
AAGTAGTGCAAAATTCCATCAAACGATACTTATGGTAACACACAATGAAAATATAGCACAAGTATGCGACTCAATTATCC
ATATTGAAGATGGAGTTGTGGTGAATACTGGTGGTGAAGTACTATGA

Protein sequence : 
MSILVTNNLVKHYGKGETKVKALNGVSIEIERDTFTAIVGTSGSGKSTLLNIIGGLDNPTSGDVIIKGKNISKIGKKDLT
VFRRRNIGFIFQNYSLMPVLNTYDNIALPVTLDKGNHIDHEYIEMLMKTLGIWDKRLKFPSELSGGQQQRVAIARALANK
PALILADEPTGNLDSKTTMEVVCLLKESSAKFHQTILMVTHNENIAQVCDSIIHIEDGVVVNTGGEVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 43
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 9e-33 42
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 1e-29 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDBI1_09470 YP_006199044.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-59 62
CDBI1_09470 YP_006199044.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-52 54
CDBI1_09470 YP_006199044.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-33 42