Gene Information

Name : CDBI1_07830 (CDBI1_07830)
Accession : YP_006198718.1
Strain :
Genome accession: NC_017179
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 1771346 - 1773403 bp
Length : 2058 bp
Strand : +
Note : 'COG2216 High-affinity K+ transport system, ATPase chain B'

DNA sequence :
ATGGAAACTAAAAAAACAAAGTTTATTACAAAAGATATTTTCAAAACTTCCATTATAGAAGCTTTTAAAAAATTAAATCC
TAAATATATGATGAAAAATCCAGTTATGTTTGTTGTAGAAATTGGATTTATAGTAACATTGATACTTACAATAGTACCTA
GTTTGTTTGGTGATGAAGGCAATAATTTAAGAGCTTATAATGGGATTGTAACAATAATCTTATTTATAACAGTCCTTTTT
GCAAATTTTGCTGAAGCTGTAGCTGAGGGAAGAGGTAAAGCTCAAGCAGATACACTTAAGAAAACTAGAAAAGATACAGT
AGCAAGGGTTATAGATACGTTAGGAAATGAAAAAATGATAAGTGCAAGTGAGCTAAAACTTGGTGATATTGTTTTAGTAA
ATGTTGGAGAAGTTATCCCAAATGATGGAGAAGTTATAGAGGGCATAGCTTCTGTGGATGAGTCAGCAATAACTGGAGAA
TCTGCACCTGTCATGAGAGAATCAGGTGGAGATTTCGCATCTGTTACAGGTGGTACTACAGTTGTAAGTGACTGGTTAAA
GATAAGAATAACAACAAAACCAGGAGAATCGTTCTTAGATAAAATGATAGCTCTTGTAGAAGGTGCTTCAAGACAAAAAA
CGCCAAATGAGATTGCTTTAAATACTTTGTTAGTAGGGTTAACACTTATATTTATGGTTGTTTTAATATCTCTTTATCCA
ATGGCAAACTATGCAGGTGTAAAGATTCCAATTTCTACTATGATAGCTCTTTTGGTATGTTTAATACCAACTACTATAGG
TGGATTGTTGTCAGCTATTGGTATTGCAGGTATGGATAGAGTAACTAGATTTAATGTAATTGCAATGTCAGGAAAAGCAG
TAGAAGCTTGTGGAGACGTTGATACTATGATTTTGGATAAGACAGGTACGATTACTTATGGGAATAGACTTGCATCAGAA
TTTATAGCAGTTGGAAATGCAGATTCAAAAGATTTAATAAATTATTCTGTTATGTGTTCATTAAAAGATGATACACCAGA
AGGAAAATCTATAGTTGATTTAGGTATGAAATTAGGTTCAACAGGTAAGACAAAAGAGGCAGAGGAAGCTGAGTTTGTAG
AATTTTCTGCACAAACTAGAATGAGTGGTATTAACTTAGCTGATGGTAGAGCTATAAGAAAAGGTGCTTATGATAGCATA
ATAAAAAGAGTAAAAGAATCTGGTGGTACAGTGCCAGAAGATTTAGAAGAAAATGTAAATCGAGTAGCTAAACTAGGAGG
AACACCTTTAGTAGTGTGTGTAGATAATGAGATATATGGAATTATCTACTTAAAAGATACAGTAAAATCAGGGCTTGTAG
AAAGATTTGCTAGACTTCGAGAGATAGGAATAAAGACAATAATGTGTACAGGGGATAATCCCTTGACAGCAGCTACAATT
GCAAGAGAAGCTGGAGTAGATGGATTTATTGCAGAATGTAAACCAGAAGATAAAATAGATGCTATAAAAAAAGAACAATT
AGAGGGTAAAATAGTTGCAATGACAGGTGATGGAACAAATGATGCTCCTGCACTTGCTCAGGCAGATGTAGGTCTTGCAA
TGAATAGTGGTACAACATCTGCAAAAGAAGCAGCAAATATGGTGGATTTAGATTCAGACCCAACTAAGATATTGGAAGTT
GTTGAAATAGGAAAACAGCTTTTAATAACTCGTGGGGCTTTGACAACATTTAGTATAGCAAATGATGTTGCAAAATATTT
TGCGATTATACCGGCTATATTTACTCTTGCAATACCTCAAATGGAGATATTAAATGTAATGAAACTTTCTACATCATTTA
GTGCGATATTATCAGCTTTAATATTTAATGCTATAATTATCCCATGTTTAATACCTCTTGCAATGAAGGGAGTAAAATAT
AGACCTATGAAATCACAAGCTATGTTAATGAGAAATATGCTTATATTTGGTCTTGGTGGAGTTATAGTACCATTTTTAGG
AATAAAATTAATTGATTTATTGATTACACCTTTAGTAATGATTCTTAATTTAGGTTAA

Protein sequence :
METKKTKFITKDIFKTSIIEAFKKLNPKYMMKNPVMFVVEIGFIVTLILTIVPSLFGDEGNNLRAYNGIVTIILFITVLF
ANFAEAVAEGRGKAQADTLKKTRKDTVARVIDTLGNEKMISASELKLGDIVLVNVGEVIPNDGEVIEGIASVDESAITGE
SAPVMRESGGDFASVTGGTTVVSDWLKIRITTKPGESFLDKMIALVEGASRQKTPNEIALNTLLVGLTLIFMVVLISLYP
MANYAGVKIPISTMIALLVCLIPTTIGGLLSAIGIAGMDRVTRFNVIAMSGKAVEACGDVDTMILDKTGTITYGNRLASE
FIAVGNADSKDLINYSVMCSLKDDTPEGKSIVDLGMKLGSTGKTKEAEEAEFVEFSAQTRMSGINLADGRAIRKGAYDSI
IKRVKESGGTVPEDLEENVNRVAKLGGTPLVVCVDNEIYGIIYLKDTVKSGLVERFARLREIGIKTIMCTGDNPLTAATI
AREAGVDGFIAECKPEDKIDAIKKEQLEGKIVAMTGDGTNDAPALAQADVGLAMNSGTTSAKEAANMVDLDSDPTKILEV
VEIGKQLLITRGALTTFSIANDVAKYFAIIPAIFTLAIPQMEILNVMKLSTSFSAILSALIFNAIIIPCLIPLAMKGVKY
RPMKSQAMLMRNMLIFGLGGVIVPFLGIKLIDLLITPLVMILNLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 6e-180 64
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 6e-179 64
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 8e-179 64
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 8e-179 64
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 8e-179 64
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 8e-179 64
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 7e-150 56
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 5e-150 56