Gene Information

Name : CDBI1_19788 (CDBI1_19788)
Accession : YP_006197097.1
Strain :
Genome accession: NC_017177
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 215171 - 215833 bp
Length : 663 bp
Strand : -
Note : 'COG1136 ABC-type antimicrobial peptide transport system, ATPase component'

DNA sequence : 
ATGATAGAAATTAGAAATTTAGAAAAAGAATATATATTAGGAAATAACTGTGTGAAAGTAATAAATAATATAAACTTAAC
CATAAATGATGGTGAGTTTGTTGCTATTGTCGGCTCTTCTGGGAGTGGAAAAACAAGCTTGCTTAATCTTTTAGGTGGGT
TAGATAAACCTTCAAGTGGTAATATATTTGTACAAAATAAGGATATAACTAAATTAAAAGACAGGGAAATGAGTGAATAT
AGAAGAGATTTAGTAGGATTTATATTCCAAGAATTCATGTTAGAAGGAAATAAAACAGTGCAAGAGAATCTTATGATGCC
ACTTATTTTTTCAAAAGTAGAAAAAAAAGAAAGACTTAATAGAGTGAATGAAGTTTTAGATAAAGTGGGGATTAAAGATA
AATTAATGTGTAAAGCAAATGAACTTTCAGGTGGCCAAAGGCAAAAAGTAGCAATTGCAAGAGCTTTAATAAATGAACCT
AAAATCTTATTAGCAGATGAGCCTACTGGAAATTTGGATAGTAAAAATGGAGAATTAATAATTAATTTGCTTAAAGAGCT
AAATAAGAATAATAATTATACTATTTTACTGGTTACACATAACATAGAACAAGCTTCTCAAGCTAAACGAATAGTTAAGA
TTAAAGATGGAGAGATCTTATGA

Protein sequence : 
MIEIRNLEKEYILGNNCVKVINNINLTINDGEFVAIVGSSGSGKTSLLNLLGGLDKPSSGNIFVQNKDITKLKDREMSEY
RRDLVGFIFQEFMLEGNKTVQENLMMPLIFSKVEKKERLNRVNEVLDKVGIKDKLMCKANELSGGQRQKVAIARALINEP
KILLADEPTGNLDSKNGELIINLLKELNKNNNYTILLVTHNIEQASQAKRIVKIKDGEIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDBI1_19788 YP_006197097.1 hypothetical protein NC_012469.1.7686878. Protein 4e-38 45
CDBI1_19788 YP_006197097.1 hypothetical protein CP001581.1.gene598.p Protein 3e-36 44
CDBI1_19788 YP_006197097.1 hypothetical protein NC_008702.1.4606598. Protein 2e-33 43
CDBI1_19788 YP_006197097.1 hypothetical protein CP001581.1.gene798.p Protein 8e-37 42
CDBI1_19788 YP_006197097.1 hypothetical protein NC_012469.1.7686946. Protein 3e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDBI1_19788 YP_006197097.1 hypothetical protein VFG0869 Protein 8e-19 41