Gene Information

Name : ABZJ_p00004 (ABZJ_p00004)
Accession : YP_005527823.1
Strain :
Genome accession: NC_017172
Putative virulence/resistance : Resistance
Product : AphA1-IAB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1722 - 2537 bp
Length : 816 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCATATTCAACGGGAAACGTCTTGCTCGAGGCCGCGATTAAATTCCAACCTGGATGCTGATTTATATGGGTATAG
ATGGGCTCGCGATAATGTCGGGCAATCAGGTGCGACAATCTATCGATTGTATGGGAAGCCCAATGCGCCAGAGTTGTTTC
TGAAACATGGCAAAGGTAGCGTTGCCAATGATGTTACAGATGAGATGGTCAGACTAAACTGGCTGACGGCATTTATGCCT
CTTCCGACTATCAAGCATTTTATCCGTACTCCTGATGATGCATGGTTACTCACCACTGCGATCCCCGGGAAAACAGCATT
CCAGGTATTAGAAGAATATCCTGATTCAGGTGAAAATATTGTTGATGCGCTGGCAGTGTTCCTGCGCCGGTTGCATTCGA
TTCCTGTTTGTAATTGTCCTTTTAACAGCGATCGCGTATTTCGTCTCGCTCAGGCGCAATCACGAATGAATAACGGTTTG
GTTGATGCTAGTGATTTTGATGACGAGCGTAATGGCTGGCCTGTTGAACAAGTCTGGAAAGAAATGCATAAGCTTTTGCC
ATTCTCACCGGATTCAGTCGTCACTCATGGTGATTTCTCACTTGATAACCTTATTTTTGACGAGGGGAAATTAATAGGTT
GTATTGATGTTGGACGAGTCGGAATCGCAGACCGATACCAGGATCTTGCCATCCTATGGAACTGCCTCGGTGAGTTTTCT
CCTTCATTACAGAAACGGCTTTTTCAAAAATATGGTATTGATAATCCTGATATGAATAAATTGCAGTTTCATTTGATGCT
CGATGAGTTTTTCTGA

Protein sequence :
MSHIQRETSCSRPRLNSNLDADLYGYRWARDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMP
LPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGL
VDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNCLGEFS
PSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aphA1b AFV53106.1 aminoglycoside (3') phosphotransferase AphA1 or APH (3')-Ia Not tested AbGRI2-1 Protein 2e-126 100
aphA1b YP_005797124.1 aminoglycoside 3'-phosphotransferase aphA1 Not tested AbaR4e Protein 2e-126 100
apha1b AGK36640.1 aminoglycoside (3') phosphotransferase AphA1b or APH(3')-Ia Not tested AbaR26 Protein 2e-126 100
aphA1b YP_005797139.1 aminoglycoside 3'-phosphotransferase aphA1 Not tested AbaR4e Protein 2e-126 100
aph(3')-Ia YP_001800929.1 aminoglycoside 3'-phosphotransferase Not tested Not named Protein 2e-126 100
aphA1b ACN81017.1 aminoglycoside (3') phosphotransferase AphA1 or APH (3')-Ia Not tested AbaR5 Protein 2e-126 100
aphA1 ADZ05811.1 aminoglycoside (3')-phosphotransferase APH (3')-Ia Not tested AbaR20 Protein 2e-95 100
aphA1 CAJ77079.1 Aminoglycoside phosphotransferase Not tested AbaR1 Protein 2e-126 100
aphA1a AGK07038.1 AphA1a Not tested SGI1 Protein 8e-126 99
aphA1a AGK07096.1 AphA1a aminoglycoside phosphotransferase Not tested SGI1 Protein 8e-126 99
aphA1 YP_005176178.1 aminoglycoside 3'-phosphotransferase protein Not tested ICEPmu1 Protein 1e-124 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABZJ_p00004 YP_005527823.1 AphA1-IAB V00359.1.orf1.gene.p Protein 5e-126 99