Gene Information

Name : ABZJ_00305 (ABZJ_00305)
Accession : YP_005524261.1
Strain : Acinetobacter baumannii MDR-ZJ06
Genome accession: NC_017171
Putative virulence/resistance : Resistance
Product : putative RND family drug transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 332233 - 333579 bp
Length : 1347 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATAAAATTAATGCTTGTTGCGGGTTTATGGAGTTTTACATCGTCGAGTTTTGCTCTAGATTTAGTTGAAACTTA
TGAGCGCGCAAAACTAAATGATCCGACGTGGCAAGCGAATCAACAACAGTTTGAAGCAGATCAGCTTAATTTAGGCTTAG
CAACAGGCGCGTTACTACCAACAGTTACATTATCTGGAAATATTACCCGTAATCGACAAACGGTAAAGCGTTCAAATTTT
CCTGGTGTTGATCAGGAAGGACTTTCCGATGCTTTGGTAAGTAATACATCGACTACCAAACAGGCTACTTTATCTGCCCG
TCAGCCTCTTTTTCGTATGGATGCATGGGAAGGTTATAAACAGGTTAAAACTTCGGTTGCCCTTAGTGAAATTACTTTAA
GACTGCAAAAACAAGATCATGTTTTAAATGTAGCTGAAGCCTATTTTAATGTATTGCGTCAGCAGGCACTTACCGCTGCA
TATTTACAAGAAGAAAAAGCCTTGCTTGAACAGCTCAATATGATGAGCGCCAAGCTTAAAGAAGGGTTGGTAGCACGTAG
TGATGTGAGTGAAGCAAATGCCCAATATCAAAATGCCCGAGCCAACCGTATTGCTACCAATGTGCAGCTTCTATTGGCTC
AAGAGCAACTATCTGAATATATTGGTCCGTATCAAGATAAGCTTGCTGTATTGAGAAGTGATTTTATCTTTCAAAAACCT
TATCCGGCACAGCTCGATGAGTGGTTAGGATTAGCCCAACAACAAAATTTAAAGATTCAGCAAGCACGTTTACAAAAGCG
ATATGCTGAAGATCAACGTCGTGTGGAAAAAGCTGCACTTTATCCACAGATAGATGCAGTGGCGAGTTATGGTTATACTA
AACAAACGCCCGAAACGCTGATTTCGACTGATGGGAAGTTTGATCAGGTCGGGGTAGAGATGAACTGGAACTTATTTAAT
GGAGGCCGGACTCGAACTTCTATTAAAAAAGCCAGTGTGGAGTTAAATAAAGCGCAAGCCCAACTTGATGCGGCCATTCG
CCGTGCCAATGTCGATGTGAAAAGTGCTTTTATGCAGGTAGATACTGACCGAGCAAAACTTGAAGCAAGAAAGGCAGCAA
TGGACTCTTCAGCACTTGTTTCTCAAGCTTCAAAAGCAAGTTATAACGAAGGCTTAAAAAGTATGGTCGATGTTTTATTG
GCGCAGCGTAATGCTTTTTCAGCAAAACAGGATTATCTTAATGCTCAGTATGACTATTTATTAAATGTATTACGTTTAAA
AGCGGCTGTAGGTCAGCTAGGGGAAAAAGATCTAGTTGAATTAAACAGCTGGTTAACGTATCAGTAA

Protein sequence :
MKIKLMLVAGLWSFTSSSFALDLVETYERAKLNDPTWQANQQQFEADQLNLGLATGALLPTVTLSGNITRNRQTVKRSNF
PGVDQEGLSDALVSNTSTTKQATLSARQPLFRMDAWEGYKQVKTSVALSEITLRLQKQDHVLNVAEAYFNVLRQQALTAA
YLQEEKALLEQLNMMSAKLKEGLVARSDVSEANAQYQNARANRIATNVQLLLAQEQLSEYIGPYQDKLAVLRSDFIFQKP
YPAQLDEWLGLAQQQNLKIQQARLQKRYAEDQRRVEKAALYPQIDAVASYGYTKQTPETLISTDGKFDQVGVEMNWNLFN
GGRTRTSIKKASVELNKAQAQLDAAIRRANVDVKSAFMQVDTDRAKLEARKAAMDSSALVSQASKASYNEGLKSMVDVLL
AQRNAFSAKQDYLNAQYDYLLNVLRLKAAVGQLGEKDLVELNSWLTYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00321 YP_008207786.1 Outer membrane protein Not tested AbaR25 Protein 0.0 100
BJAB0868_00325 YP_008211651.1 Outer membrane protein Not tested AbaR26 Protein 0.0 100

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABZJ_00305 YP_005524261.1 putative RND family drug transporter NC_010400.5987140.p0 Protein 0.0 99
ABZJ_00305 YP_005524261.1 putative RND family drug transporter NC_011595.7058144.p0 Protein 0.0 99
ABZJ_00305 YP_005524261.1 putative RND family drug transporter NC_010410.6003655.p0 Protein 0.0 99