Gene Information

Name : ABZJ_02323 (ABZJ_02323)
Accession : YP_005526279.1
Strain : Acinetobacter baumannii MDR-ZJ06
Genome accession: NC_017171
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2402085 - 2402939 bp
Length : 855 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACAAAAAAGATATTCTTTTCCAATTACCTTAATGGCTCGATTACTTCATGTTTCAGTTTCATGTTTTTATGATTG
GCTCAAGAGAGGCGTGAGCAAAAGAACGATTCAACGAAATCAACAGACGATATTGGTGAAAATAGCCCATGAGGAGACAA
AGCAGAGCTATGGTTATATTCGATTAACCAAATACTTACAAGCTCAGGGCATAAAAATGAGTATGTACGCTGTACGTCAG
ATAAAAGCGCTGAACCACCTGTATTGTAAGCGACACAAGCGTTTTAAAAGGACTACGAATAGTGACCATAATCGAGCGAT
CTATGAAAACCTGCTGGAGCAACAATTCTCAATGACTAGACCAAATCAAGCATGGTCAAGTGATATTACGTACATATGGA
CTGTTGAAGGATGGCTGTACTTAGCAGCGGTAAAAGACCTTTACACGAAGCAAGTGGTTGGCTATAGCTTAAATGAGCGC
ATGACAACACAGCTTGTTTGTAATGCGCTAAATATGGCTATTCACAATCAAAAACCAACCAAAGAACTGATTGTGCATTC
AGACAGAGGAAGTCAATATTGCAGCCATGAATATCGAAATATACTTGAGCAATATGGTTTTCAAGGTTCAATGAGCAAGC
GCGGAGACTGTTACGATAATGCACCGATTGAAAGCTTTTGGGGAATACTGAAAAATGAGTTAGTGCATCATTACAACTAT
CAAACCAGAGAAGAAGCCAAAGCAGATATTATAAAATACATTGAATTATTTTATAATCATCGAAGAATTCAAAAGGGTTT
GGGTTTTAAGACACCAAATCAAATGGCCGAAGACTTTTATAAGTTGGCTGCCTAG

Protein sequence : 
MKQKRYSFPITLMARLLHVSVSCFYDWLKRGVSKRTIQRNQQTILVKIAHEETKQSYGYIRLTKYLQAQGIKMSMYAVRQ
IKALNHLYCKRHKRFKRTTNSDHNRAIYENLLEQQFSMTRPNQAWSSDITYIWTVEGWLYLAAVKDLYTKQVVGYSLNER
MTTQLVCNALNMAIHNQKPTKELIVHSDRGSQYCSHEYRNILEQYGFQGSMSKRGDCYDNAPIESFWGILKNELVHHYNY
QTREEAKADIIKYIELFYNHRRIQKGLGFKTPNQMAEDFYKLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 7e-59 46
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 5e-59 46
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 5e-59 46
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 5e-59 46
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-57 45
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-58 45
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 6e-59 45
unnamed AAF09030.1 unknown Not tested SHI-O Protein 6e-59 45
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 6e-59 45
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 8e-42 43
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 6e-42 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-41 42
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-42 42
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-42 42
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABZJ_02323 YP_005526279.1 integrase catalytic subunit VFG1706 Protein 3e-59 46