Gene Information

Name : A1122_21612 (A1122_21612)
Accession : YP_005523917.1
Strain :
Genome accession: NC_017169
Putative virulence/resistance : Virulence
Product : F1 capsule protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 59344 - 60120 bp
Length : 777 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGATTTTAAATAGATTAAGTACGTTAGGAATTATTACTTTCGGCATGCTTAGTTTTGCTGCGAACTCTGCTCAACCAGA
TATCAAATTCGCAAGCAAAGAGTATGGCGTGACTATAGGTGAGAGTAGGATCATATACCCGTTAGATGCTGCTGGCGTTA
TGGTCTCGGTGAAAAACACCCAAGATTATCCGGTTCTCATTCAGTCTAGGATCTACGACGAGAATAAAGAAAAAGAATCA
GAGGATCCTTTCGTGGTCACTCCGCCATTGTTTCGATTGGATGCTAAGCAACAAAATTCTTTGCGTATAGCTCAGGCTGG
AGGTGTTTTCCCGCGAGATAAAGAGAGCCTAAAGTGGTTATGCGTAAAAGGGATTCCACCAAAGGATGAAGATATATGGG
TTGATGATGCGACAAATAAGCAAAAATTCAATCCAGACAAAGATGTGGGAGTGTTCGTGCAATTCGCAATTAATAATTGC
ATTAAGCTTTTGGTTCGACCGAATGAATTAAAAGGAACCCCTATACAGTTTGCTGAAAACTTAAGCTGGAAAGTTGATGG
GGGGAAGCTAATTGCTGAAAACCCCTCACCTTTCTACATGAACATAGGTGAATTAACATTTGGAGGGAAAAGTATTCCTT
CTCACTATATTCCACCTAAATCGACGTGGGCTTTTGATTTGCCAAAAGGACTAGCGGGAGCACGTAATGTTTCGTGGAGA
ATAATTAATGATCAGGGAGGGTTGGATCGTTTGTATTCCAAAAATGTGACTTTATGA

Protein sequence : 
MILNRLSTLGIITFGMLSFAANSAQPDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKES
EDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDVGVFVQFAINNC
IKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGLAGARNVSWR
IINDQGGLDRLYSKNVTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 5e-49 42
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 5e-49 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1122_21612 YP_005523917.1 F1 capsule protein VFG0420 Protein 9e-119 100
A1122_21612 YP_005523917.1 F1 capsule protein VFG0943 Protein 8e-44 43