Gene Information

Name : A1122_02555 (A1122_02555)
Accession : YP_005520208.1
Strain : Yersinia pestis A1122
Genome accession: NC_017168
Putative virulence/resistance : Virulence
Product : Clp ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 561402 - 563990 bp
Length : 2589 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
GTGTATCAACGCGAACGTCTTTTTAATCGATTGGGCACTTTTGCCTATAAAACTTTTGTTGAAGCCACCCGTCTTTGCCG
CAGTTATCGGCATGAGTATGTGGAGCTTGAACATTGGTTAAAAATTCTCATGGATCAACAGCGTGGGGATATTCCTGCTC
TACTGACGCATTACGGACTGAGCCAGACGGTTATCTCCACGCAATTGGATCGCATTATTCAGCATATGCCCGTCACCAAA
GCATCGGTGCAGGATTTATCATCACGCTTGGAGTCCGTGGTCGAAGGCGGATTGGTGTTGAGCCAATTGATGGCGTCACC
TTCTCCTATCCGTACCTCGCATATTTTACTGGCACTATTACAGGATACCCAGCATCAGCGCTGGTTATACCGCCTGTGCG
ATGAATTCAAAAAGCTGCCGGTCCCACAGGTTGCAGAGGAATATGAAGGCCTATTAGTTAACTCCATTGAACAGACCAGC
GAGGTTCAAAGAGGCGACGCATTAGTGACGGAAACGGACAGCAGCTCATCAAAAGAAGCGCATGCGGCATTGAACAAATG
GTGTAACGACCTTACCCAGCAAGCCCGTGACGGTGAGATTGACCCCGTTATTGGTCGTGAAGCAGAACTGCGTCAAGTGA
TTGATATTTTACTCCGTCGCCGTCAGAACAACCCTATTTTGGTTGGGGAAGCGGGGGTCGGTAAAACGGCGGTGGTTGAA
GCGCTAGCGCGAAAACTGGCCAGTGGCGATGTCCCTCCGCTGTTGCAAGGGGCGCGTCTGCTTTCTCTGGATTTGGGGAG
GATGCAAGCCGGTGCCAGTATGCGCGGTGAATTTGAATCACGTCTTAAATCCCTGATCGATGGCATCAGCCAATCGGATA
CCCCGGTTATTCTGTTTTGTGATGAAGCCCATACGTTGGTGGGGGCAGGCGGGCAGGCGGGCACGGGGGATGCGGTCAAC
CTGCTTAAACCGATGTTGGCGAGGGGCGCATTGCGCATGATCGCCGCCACCACCTGGTCAGAGTATAAACAGTTTATTGA
ACCTGACGCCGCGCTGACCCGGCGTTTCCAGCGGGTATTGATTGGCGAGCCAAACGAATCTACCGCCGTCGATATGCTAC
GGGCGATTGCGCCACATTTTGCTCAACATCATAACGTCACTATCCGCGACGGTGCCATTCACGCGGCGGTGCGCCTGTCA
TTACGCAACCTGCCTTCCCGGCAGTTGCCCGATAAAGCCATCAGTCTGCTCGACACCGCTTGCGCGCGGGTCGCGCTCAG
CCAATATGCCCAACCACAGGCGATTGAACAGTTATCGGCCCAACTGGATGTGCTCAAAACCGAGCATCAATATCTGGTAC
GGGAGAAGCAACTGGGCGAAGCGGTTGATCAACGGCTAGATGACGTTCAGACACAGATCCAGGCGTTTGAACATGAACTA
ACCGCCTTGCAAAGCCGCCATCTGCATGAGCAACAGCTAGTGAGGGAGGTCCTGCCGGAGGGAGAAGGCAGTGGCATGAT
GACGGAAAATGCCCGCTGGGGTGAACTGATGGCGTTACAGGAAGCGTCGCCACTGGTCTATCCATGGGTTGATGAGCAGA
GCATCGCCGCGGTGCTTTCCGATTGGACCGGGATCCCGTCCGGCAAAATGTTGCAGGACGATATTGAATGCGTCCTGAAT
CTTGAACAGCGTCTCGGTGATCATATTTTCGGGCAACGCAACGCTATCAAAGAGATTTCGCAGGCGATACGTATTGCTCG
GGCGGGCATCCAGTCTCAGGAGCGGCCACTCGGGATCTTCCTGCTGGCGGGGTCAACCGGTACGGGCAAAACAGAAACGG
CCAATGTACTGGTCGAAACCTTGTATGGCGGTGCTCATAACCTTATTACCTTCAATATGAGTGAGTTCCAAGAGGCGCAT
ACCTTATCCACGCTGAAAGGCGCACCTCCGGGCTATGTCGGCTATGGCAAGGGGGGGAAATTAACCGAAGCGGTAAGACG
CAAACCTTATTCGGTCATCCTGCTTGATGAGTTTGATAAAGCTCACGCCGATATTCAGGACGCCTTTTATCAGGTCTTCG
ACAAAGGGTGGATGGAAGATGCCGAAGGGCGTCGGGTCAGTTTCCGCCAGTGTTTCATCTTACTGACCTGTAATCAGGGC
GCGGAAGAGATCGAACAGGCTTACCTCACCGCCAACGATATCAAACCCGGTGCATTAAAACCGTTGGTATACGACGCCCT
GTTGCGCCGCTTTGCGCCAGCGCTGTTAGCCAGGGTCAATATCATTCCTTATATCCCATTAGATCAGGACGCTCTGGCAC
AGATCGCCTCTCATCATCTTGCGCGCTTACAAACGCGCCTGTGGGATGAAATTGGTGCCACTTTGGTGACCGAGGGGGAT
ATCCCCGGCTGGATCGCCTCACGGGTTTGCAGCCATCCGAACCATGGTCGTGCGGTGGAAGAACTCTTGCGTCAAACCTT
ACTTCCCGCTGTTGGCAATGAAGTGTTGAAGCGTCGCCATGAGGCTGAACCGCTGAGAGAGATACGCCTGATTGTTGAGG
AGACAGAACTGAGTATTGAGTTCGCGTAG

Protein sequence :
MYQRERLFNRLGTFAYKTFVEATRLCRSYRHEYVELEHWLKILMDQQRGDIPALLTHYGLSQTVISTQLDRIIQHMPVTK
ASVQDLSSRLESVVEGGLVLSQLMASPSPIRTSHILLALLQDTQHQRWLYRLCDEFKKLPVPQVAEEYEGLLVNSIEQTS
EVQRGDALVTETDSSSSKEAHAALNKWCNDLTQQARDGEIDPVIGREAELRQVIDILLRRRQNNPILVGEAGVGKTAVVE
ALARKLASGDVPPLLQGARLLSLDLGRMQAGASMRGEFESRLKSLIDGISQSDTPVILFCDEAHTLVGAGGQAGTGDAVN
LLKPMLARGALRMIAATTWSEYKQFIEPDAALTRRFQRVLIGEPNESTAVDMLRAIAPHFAQHHNVTIRDGAIHAAVRLS
LRNLPSRQLPDKAISLLDTACARVALSQYAQPQAIEQLSAQLDVLKTEHQYLVREKQLGEAVDQRLDDVQTQIQAFEHEL
TALQSRHLHEQQLVREVLPEGEGSGMMTENARWGELMALQEASPLVYPWVDEQSIAAVLSDWTGIPSGKMLQDDIECVLN
LEQRLGDHIFGQRNAIKEISQAIRIARAGIQSQERPLGIFLLAGSTGTGKTETANVLVETLYGGAHNLITFNMSEFQEAH
TLSTLKGAPPGYVGYGKGGKLTEAVRRKPYSVILLDEFDKAHADIQDAFYQVFDKGWMEDAEGRRVSFRQCFILLTCNQG
AEEIEQAYLTANDIKPGALKPLVYDALLRRFAPALLARVNIIPYIPLDQDALAQIASHHLARLQTRLWDEIGATLVTEGD
IPGWIASRVCSHPNHGRAVEELLRQTLLPAVGNEVLKRRHEAEPLREIRLIVEETELSIEFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-147 45
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-107 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-107 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1122_02555 YP_005520208.1 Clp ATPase VFG2076 Protein 5e-156 44
A1122_02555 YP_005520208.1 Clp ATPase VFG2084 Protein 1e-123 41