Gene Information

Name : A1122_17340 (A1122_17340)
Accession : YP_005523107.1
Strain : Yersinia pestis A1122
Genome accession: NC_017168
Putative virulence/resistance : Virulence
Product : putative chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3709249 - 3710028 bp
Length : 780 bp
Strand : -
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGCGCAGAACGCTCCTTACTATATTGTCCTTTTTAAGGACAGTGCGACTCTTAACGACACTGACACTCTTAATATTATC
GGTTGTGGCGACTGTGGCTCGTGCTGAAGTGATGATCAGTGGGACACGTGTTATTTATGAAGAGAAACAACGTGAGGGGG
TGGTAAAGGTTTCCAATACGGGCGATATGCCGGTCCTGCTTCAGGCCTGGATAGATAAAGGTGATGCGAACGCACGCCCA
GAGGCTATCAAGGTGCCGTTTAGTGTAACCCCCCCAGTAGTACGTTTAGACCCTAAAAGGGATCAGACTATTCGTCTTTT
TCGCACTGATGGTGGATTAGCGGCTGATCGTGAAACCCTATTTTGGTTTAACTTATTAGAAGTCCCGCCAAAGCCAATCC
AAAGTGCGGCTGGTGGTGAGAACAAAATGCAATTGGCTTTCCGTACCAGAATTAAAATGTTTTACCGCCCTGAAGGATTA
ACCGTATTACCTGCGCAAGCGGCCAAGAGTCTCGCATTTTCAATGAAAGGCAATCAGATCGTCATAAAGAATGCCTCACC
GTATTACATTACCTTGAGAAAGCTAGAATTACGCACGTCAGAGAAAGGGCCTGTATTGGCTAATTTTACTAAAATCAATA
ATAAAATGGTTGCCCCTTTTAGTGAACTAAGCTTACCTACGAGTGCAAAAGCATCGATCAATAATTCGGCACAAGTTTTT
TATTCTGTTATTAATGATCAGGGCGGCGAAACTCAAGGTACGCAAAAACTGACCCAATAA

Protein sequence : 
MRRTLLTILSFLRTVRLLTTLTLLILSVVATVARAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARP
EAIKVPFSVTPPVVRLDPKRDQTIRLFRTDGGLAADRETLFWFNLLEVPPKPIQSAAGGENKMQLAFRTRIKMFYRPEGL
TVLPAQAAKSLAFSMKGNQIVIKNASPYYITLRKLELRTSEKGPVLANFTKINNKMVAPFSELSLPTSAKASINNSAQVF
YSVINDQGGETQGTQKLTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 2e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1122_17340 YP_005523107.1 putative chaperone protein VFG0007 Protein 2e-38 43
A1122_17340 YP_005523107.1 putative chaperone protein VFG1145 Protein 3e-33 42