Gene Information

Name : A1122_16540 (A1122_16540)
Accession : YP_005522947.1
Strain : Yersinia pestis A1122
Genome accession: NC_017168
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3548559 - 3549215 bp
Length : 657 bp
Strand : -
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence :
TTGATCAGCGTTCTTCTTGTTGATGACCACGAATTGGTGCGCGCAGGGATACGACGCATTCTTGACGACATCAAAGGTAT
CAAAGTCGCGGGTGAGATGCAGTGTGGTGAAGATGCGGTCAAATGGTGCCGTAGCCATGTTGTAGATATCGTCCTGATGG
ATATGAATATGCCCGGTATTGGCGGGTTGGAAGCAACACGTAAAATTTTACGTTTTTCGCCGGATACTAAAGTTATAATG
CTAACCATTCATACGGAGAATCCATTACCGGCAAAGGTCATGCAAGCGGGAGCGGGGGGGTATCTCAGTAAAGGAGCTGC
TCCGCAGGATGTTATAACCGCCATCCGTATGGTACATGCTGGGCAACGTTACATAGCTTCTGATATTGCACAACAAATGG
CACTGAGCCAGCTTGAGCCTCCAGCAGAAACACCTTTTAGCTGTTTGTCGGAGCGTGAGTTGCAAATAATGATAATGATA
ACGAAAGGCCAAAAGGTGAATGAGATCTCAGAACAGCTTCATCTGAGTCCGAAAACGGTTAATAGTTACCGCTACCGTAT
GTTCAGTAAACTCAATATTAGTGGTGACGTTGAATTAACCCATTTGGCTATTCGCCACGGTTTATTTAATGCGGAGACGT
TATCAAATAGTGACTGA

Protein sequence :
MISVLLVDDHELVRAGIRRILDDIKGIKVAGEMQCGEDAVKWCRSHVVDIVLMDMNMPGIGGLEATRKILRFSPDTKVIM
LTIHTENPLPAKVMQAGAGGYLSKGAAPQDVITAIRMVHAGQRYIASDIAQQMALSQLEPPAETPFSCLSERELQIMIMI
TKGQKVNEISEQLHLSPKTVNSYRYRMFSKLNISGDVELTHLAIRHGLFNAETLSNSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-48 48
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-48 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1122_16540 YP_005522947.1 response regulator VFG1889 Protein 4e-54 48