Gene Information

Name : A1122_00180 (A1122_00180)
Accession : YP_005519742.1
Strain : Yersinia pestis A1122
Genome accession: NC_017168
Putative virulence/resistance : Unknown
Product : insertion sequence protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 39077 - 39445 bp
Length : 369 bp
Strand : +
Note : COG1662 Transposase and inactivated derivatives, IS1 family

DNA sequence : 
ATGTGGTCATTTGTGGGCAACAAAAAGCAGCAACGTTGGCTTTGGTATGCCTGGGAGTCTCGCCTCAAACGTATTATTGC
TCATGTTTTTGGTCGTCGGAGCAAAAAGACATTTCGCCAATTATTGGGGTTGCTGTCAGGTTTCAATATCGTCTTCTGGT
GTACCGACAACTTCAGTGCTTATGAGATGTTGCCGGATGAAAAACACATCAGGAGCAAGCTTTACACGCAGCGGATTGAG
CGTGAAAACCTGAATATCCGTAATCGGTTGAAACGACTGAACCGCAAGACTCTCGGAGACTCAAAGTCGGCAGAAATGCA
TGACAGGATCATCGGTACGTTCATTGAGCGTGAGCATTACCTAGTGTGA

Protein sequence : 
MWSFVGNKKQQRWLWYAWESRLKRIIAHVFGRRSKKTFRQLLGLLSGFNIVFWCTDNFSAYEMLPDEKHIRSKLYTQRIE
RENLNIRNRLKRLNRKTLGDSKSAEMHDRIIGTFIEREHYLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 9e-16 51
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 1e-15 50
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 2e-15 50
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 1e-15 50
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 1e-15 50
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 1e-15 50
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 1e-15 50
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 9e-16 50
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-15 50
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 2e-15 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1122_00180 YP_005519742.1 insertion sequence protein VFG0612 Protein 5e-16 50