Gene Information

Name : A1122_11990 (A1122_11990)
Accession : YP_005522050.1
Strain : Yersinia pestis A1122
Genome accession: NC_017168
Putative virulence/resistance : Unknown
Product : IS100 ORF1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2620742 - 2621908 bp
Length : 1167 bp
Strand : -
Note : COG4584 Transposase and inactivated derivatives

DNA sequence :
ATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACT
GGGGATCTCCCGCAATACCGTTAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACGCCGCGACCTGCTGTTG
CTTCACTCCTGGATGAATACCGGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTA
ATCGCTCGCGAGATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGCATTCATTCGTTCTCTCTCGGTTCC
TCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTAATG
GTCGCTCACCGCTTCACGTGTTCGTTGCTGTTCTCGGATACAGCCGAATGCTGTACATCGAATTCACTGACAATATGCGT
TATGACACGCTGGAGACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAATAT
GAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGG
AGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTACACC
CGTAACAGTTTTTACATCCCACTAATGACTCGCCTGCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCGCCA
CGGTCTGCGCTGGCTGCACGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGCGATCGCTGGCTCG
AAGAGCAGCAGTCCATGCTGGCACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCTTGATGAAAATCTGGTGAACTTC
GACAAACACCCCTGCATCATCCACTCTCCATCTACGACTCATTCTGCAGAGGAGTGGCGTGATGATGGAACTGCAACATC
AACGACTGATGGCGCTCGCCGGGCAGTTGCAACTGGAAAGCCTTATAAGCGCAGCGCCTGCGCTGTCACAACAGGCAGTA
GACCAGGAATGGAGTTATATGGACTTCCTGGAGCATCTGCTTCATGA

Protein sequence :
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATV
IAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMR
YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT
RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNF
DKHPCIIHSPSTTHSAEEWRDDGTATSTTDGARRAVATGKPYKRSACAVTTGSRPGMELYGLPGASAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 2e-156 100
y2411 NP_669718.1 transposase Not tested HPI Protein 2e-156 100
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 1e-156 100
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 2e-156 100
api83 CAF28557.1 transposase Not tested YAPI Protein 1e-156 100
unnamed CAA21403.1 - Not tested HPI Protein 2e-156 100
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 2e-155 99
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-155 99
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 1e-154 99
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 2e-155 99
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 2e-155 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1122_11990 YP_005522050.1 IS100 ORF1 VFG1626 Protein 1e-155 99
A1122_11990 YP_005522050.1 IS100 ORF1 VFG1607 Protein 1e-155 99
A1122_11990 YP_005522050.1 IS100 ORF1 VFG1461 Protein 7e-155 99
A1122_11990 YP_005522050.1 IS100 ORF1 VFG1514 Protein 1e-155 99