Gene Information

Name : A1122_11290 (A1122_11290)
Accession : YP_005521918.1
Strain : Yersinia pestis A1122
Genome accession: NC_017168
Putative virulence/resistance : Virulence
Product : Hcp1 family type VI secretion system effector
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2481658 - 2482143 bp
Length : 486 bp
Strand : +
Note : COG3157 Hemolysin-coregulated protein (uncharacterized)

DNA sequence :

ATGGCGCAAGATATGTTTATCAAAATTGATGGTATTGAAGGTGAGTCTTTGGATGCCAATCACAAAAACGAAATCCAGGT
ATTAGCTTGGAACTGGGATGTTGCTCAACACTCGAATATGCACAGCGGTTCAGGTGGCGGTTCAGGTAAAGCCTCTGTTT
CAGATTTTTGCTTCGCACATTATATCGATAAAGCTAGCCCGAACTTATTGAGCTATTGCTTGTTGGGTAAGCACATTAAA
AATGTTCAGTTCGTACTGCGTAAAGCTGGTGGCGATCCGCTGGAATATCTGACAATTAAATTTACCGATGTCATCATTAC
TCGTGTTGATATGGCGGGTTCTTTGGAAGATGAAACGCGTCCACGTGAAGAAATTCGTTTCTCATTCACTAAGATGACTC
AGGACTATGTTATGCAGAATGCTGAAGGCCATAAGTCTGGCGTTATTTCTGCTAACTACGATGTTAAAGCTAACATGCAC
AGCTAA

Protein sequence :

MAQDMFIKIDGIEGESLDANHKNEIQVLAWNWDVAQHSNMHSGSGGGSGKASVSDFCFAHYIDKASPNLLSYCLLGKHIK
NVQFVLRKAGGDPLEYLTIKFTDVIITRVDMAGSLEDETRPREEIRFSFTKMTQDYVMQNAEGHKSGVISANYDVKANMH
S

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0302	NP_454882.1	conserved hypothetical protein	Not tested	SPI-6	Protein	6e-37	55

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
A1122_11290	YP_005521918.1	Hcp1 family type VI secretion system effector	VFG2071	Protein	4e-21	42