Gene Information

Name : A1122_10565 (A1122_10565)
Accession : YP_005521776.1
Strain : Yersinia pestis A1122
Genome accession: NC_017168
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2325587 - 2326273 bp
Length : 687 bp
Strand : +
Note : COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component

DNA sequence : 
ATGCCAGCGGAAAACGTTCTTGAAGTTCATCATCTTAATAAGCACGTCGGTCAGGGTGAGCAACAGCTCTCCATCCTTAC
CGGAGTTGAGCTGGTTGTCAAACCTGCCCAGACAATTGCGCTGATTGGCGAGTCGGGTTCAGGCAAATCAACATTATTGG
GGATTCTGGCCGGGCTGGATGATGGCAGCAGCGGTGATGTGAGCTTGCTTGGGCAGTCATTGACCACGATGGATGAAGAA
GGTCGCGCGCTACTCCGGGCGAAAAATGTCGGCTTTGTCTTTCAGTCGTTTATGTTGGTTCCTACATTGAACACGCTTGA
AAACGTTCAACTACCGGCATTACTCCGTGGTGAGAGTGATCGCCAAAGCAAATCGCAAGCTATTGAATTATTGGAGCAAC
TTGGGCTGGGCAAGCGCCTTTACCATCTTCCCGCCCAACTGTCCGGTGGTGAACAACAGCGAGTTGCACTGGCCCGGGCT
TTCAGTGGGCGGCCAAAAATCTTATTTGCTGATGAGCCAACCGGTAATCTTGACCGGCAGACGGGTGATCGTATCGCTGA
TTTGCTGTTTTCCCTAAACCGGGATTTCGCGACCACGTTGATTCTGGTCACACATGATGAACAACTGGCCGGTCGTTGTC
AGCGTCGGTTGCGCCTGAGGGACGGTAAATTGTGGGAGGAGTCATGA

Protein sequence : 
MPAENVLEVHHLNKHVGQGEQQLSILTGVELVVKPAQTIALIGESGSGKSTLLGILAGLDDGSSGDVSLLGQSLTTMDEE
GRALLRAKNVGFVFQSFMLVPTLNTLENVQLPALLRGESDRQSKSQAIELLEQLGLGKRLYHLPAQLSGGEQQRVALARA
FSGRPKILFADEPTGNLDRQTGDRIADLLFSLNRDFATTLILVTHDEQLAGRCQRRLRLRDGKLWEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1122_10565 YP_005521776.1 putative ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 6e-34 45
A1122_10565 YP_005521776.1 putative ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 3e-38 43
A1122_10565 YP_005521776.1 putative ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 8e-36 41