Gene Information

Name : ribD (A1122_10045)
Accession : YP_005521676.1
Strain : Yersinia pestis A1122
Genome accession: NC_017168
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 2215608 - 2216717 bp
Length : 1110 bp
Strand : +
Note : COG0117 Pyrimidine deaminase

DNA sequence : 
ATGCAGCCCGATGAGTTCTATATGGCCCGAGCTTTTGAACTGGCGCGTTTGGGGCGCTTTACGACGTCGCCTAACCCCAA
TGTAGGCTGTGTCTTGGTTCGTGATGGCGAGATCGTCGGCGAAGGTTACCACTTACGTGCTGGAGAGCCGCATGCTGAAG
TGCATGCGTTACGTATGGCGGGTGAGAAAGCGCGAGGAGCCACGGCTTATGTCACTCTTGAGCCGTGTAGCCATTATGGT
CGGACGCCACCTTGTGCTGATGCGTTGGTCGCCGCAGGTGTGATACGGGTTGTTGCTGCCATGCAGGATCCTAATCCAGA
AGTTGCCGGGCGAGGGCTGTATAAATTAAAACAGGCCGGTATCGCTGTCGATCATGGCTTGATGTTAGCTGAGGCCGAGG
CTGTTAACCTTGGTTTCTTGAAGCGTATGCGGACTGGTTTCCCTTATGTGCAATTGAAAATGGCGGCATCATTGGACGGG
CGTACAGCCATGGCATCAGGTGAGAGCCAGTGGATTACCTCACCACAGGCACGCCAGGATGTGCAACGCTTTAGGGCCGA
GAGTTCAGCTATTCTCAGTACCAGTGCCACAGTATTGGCAGATGACCCTTCGCTGACGGTACGCTGGCAGGATTTAGATG
CCGAAACGCAGGTTTTGTATCCTCATGATAGTGTTCGACAGCCAGTAAAAATTATACTCGATAGCCATAACCGCGTGACT
CCACGGCATAAAGTGATACAGCAAGACGGCCCATGCTGGCTGGCTCGCGTAGATGCCGATGATCAGCCATGGCCTGGCAA
TATCGAACAACTGTTGCTACCACGTTATGGTAATGGCGTGGACTTGGTTGTGTTGATGATGCAATTGGGGAAACGGAATA
TTAACTCTGTCTGGGTAGAGGCTGGGCCACAACTGGCGGGTGCATTGTTACAAGCCGGAGTGGTGGATGAGTTAATCCTT
TATATCGCCCCCAAACTCTTGGGCAGTGATGCGCGTGGATTATGCGAGCTAGCTGGGCTGACGAATTTATCGCAAGCGCC
TGAGTTTGCATTTAGCGATGTACGGCTGGTCGGTCCGGACTTGCGTTTACGCTTGAAGCCAAAGTATTAA

Protein sequence : 
MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMAGEKARGATAYVTLEPCSHYG
RTPPCADALVAAGVIRVVAAMQDPNPEVAGRGLYKLKQAGIAVDHGLMLAEAEAVNLGFLKRMRTGFPYVQLKMAASLDG
RTAMASGESQWITSPQARQDVQRFRAESSAILSTSATVLADDPSLTVRWQDLDAETQVLYPHDSVRQPVKIILDSHNRVT
PRHKVIQQDGPCWLARVDADDQPWPGNIEQLLLPRYGNGVDLVVLMMQLGKRNINSVWVEAGPQLAGALLQAGVVDELIL
YIAPKLLGSDARGLCELAGLTNLSQAPEFAFSDVRLVGPDLRLRLKPKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-59 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-59 49