Gene Information

Name : A1122_09940 (A1122_09940)
Accession : YP_005521655.1
Strain : Yersinia pestis A1122
Genome accession: NC_017168
Putative virulence/resistance : Virulence
Product : positive response regulator for pho regulon
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2192706 - 2193395 bp
Length : 690 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGGCAAGACGCATACTGGTGGTGGAAGATGAAGCACCAATCCGTGAGATGGTGTGCTTTGTGTTGGAGCAAAATGGCTA
CCAACCGTTAGAAGCCGAAGATTATGACAGCGCGGTAGCTCGCCTGTCGGAGCCTTTTCCTGATTTAGTGCTGTTAGACT
GGATGTTACCCGGCGGCTCGGGTATTCAGTTTATTAAACATATGAAACGTGAAGCTTTGACCCGGGATATTCCGGTGATG
ATGCTGACCGCTCGTGGCGAAGAAGAAGATCGTGTGCGCGGTTTGGAAGTGGGCGCAGATGATTATATTACCAAGCCTTT
TTCACCTAAAGAGCTGGTAGCGCGGATCAAAGCGGTAATGCGGCGGATATCGCCAATGGCCGTTGAAGAAGTGATTGAAA
TGCAAGGGTTGAGCCTTGACCCTTCATCTCACAGGGTAATGGCGAATGATCAGGCGCTAGATATGGGGCCGACCGAGTTT
AAATTATTACACTTCTTTATGACTCATCCCGAGCGTGTTTATAGCCGTGAACAGTTGCTTAATTATGTTTGGGGCACTAA
CGTTTATGTAGAAGATCGTACGGTTGATGTGCATATTCGTCGGTTACGCAAGGCGCTTGAAACTGATGGTCACGATAAAA
TGGTACAAACTGTCCGGGGAACTGGATACCGTTTCTCAACGCGCTACTGA

Protein sequence : 
MARRILVVEDEAPIREMVCFVLEQNGYQPLEAEDYDSAVARLSEPFPDLVLLDWMLPGGSGIQFIKHMKREALTRDIPVM
MLTARGEEEDRVRGLEVGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPSSHRVMANDQALDMGPTEF
KLLHFFMTHPERVYSREQLLNYVWGTNVYVEDRTVDVHIRRLRKALETDGHDKMVQTVRGTGYRFSTRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-34 41
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 2e-31 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 7e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1122_09940 YP_005521655.1 positive response regulator for pho regulon HE999704.1.gene2815. Protein 5e-39 44
A1122_09940 YP_005521655.1 positive response regulator for pho regulon CP001918.1.gene5135. Protein 3e-24 42
A1122_09940 YP_005521655.1 positive response regulator for pho regulon BAC0596 Protein 2e-33 41
A1122_09940 YP_005521655.1 positive response regulator for pho regulon CP001138.1.gene2239. Protein 2e-33 41
A1122_09940 YP_005521655.1 positive response regulator for pho regulon CP000647.1.gene2531. Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1122_09940 YP_005521655.1 positive response regulator for pho regulon VFG1563 Protein 4e-34 41
A1122_09940 YP_005521655.1 positive response regulator for pho regulon VFG1702 Protein 3e-34 41