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Name : A1122_00960 (A1122_00960) Accession : YP_005519897.1 Strain : Yersinia pestis A1122 Genome accession: NC_017168 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 211587 - 213098 bp Length : 1512 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGACAGATATTGAGTCTGAGTTCCATACTTTGCCATTAACGTTTAGTTGGTCAAAGAGTCATGGTGTGCTTATTCTGCC TATGGCACAGGGCAGTCAGTTGATTTGTCGTAAATCAGCGACATTGGAGGCTATACTTGAAGGGAATCGGGTGGCTCATA GTCCAATACTTTTTAATTTAGTTACTGATGAAGAGTTTGAAAATAATTTAACTGAACGCTACCAAAATAATTCGGCTGAC CCATATCAGACAATGAGCGTTATCAGCAATGAGATCGACATTTACTCTTTTGCTAACGAATTATCTGACGATGATGATTT ATTGGATATAAATGATGAAGCACCTGTAATAAAATTAATCAATAGCATTCTGGTCGAAGCAATTAAAGAGTTAGCATCTG ATATACACATAGAGTCTTTCGATAAAAAACTTACTGTAAGATTTCGTATTGATGGTGTGTTAAGGAAAATATTGGAATTA CAGCGCCATGTTGCACTATTATTAGTGTCGCGTATAAAAGTCATGGCCAAATTAGATATTGCAGAAAAACGTATTCCACA AGATGGGCGCATAGCTCTAAATTTAGCGGGTAGAGCATTGGATGTTCGTGTTTCGGTATTACCATCTAGCCATGGTGAAC GGGTCGTTATGCGTTTGCTTGACAAAAATAGCATTAAATTGGATTTACCCTCATTAGGTATGTCGAAAGATAACTGTATT TCTATGAATACGCAGGTACATAAACCCCATGGCATTATCTTGGTTGTTGGCCCAACGGGTTCGGGTAAAAGCACTACGTT ATATGCTGCTTTAATGGGGATTGACGCGAATGAGAAAAATATTATGACTGTAGAAGACCCTATTGAGTTCGACATACCTG GTATATCCCAAACGCAAGTAAACCCAAAAATTGAAATGACATTTGCTCGTAGCTTAAGGGCAATATTACGCCAAGATCCT GACGTTATTCTTATCGGTGAAATTCGTGATATTGAAACGGCACAGATAGCGGTCCAAGCTTCTCTAACCGGCCATTTAGT TCTATCTACATTACATGCCAACAGTGCGATAGGTGCAGTGACCAGACTGAAGGATATGAATGTAGAGGCATTTATGCTTT CAAGTTCATTATTGGCCATCATATCTCAGCGGTTGGTTAGAAGATTATGTATAGCGTGTCGCCAAGAGTCGTCAGTGACG GAGAAGGTATTACAACGTCTGAATATTGATGATAAATGCTCTTTGGTTGGTTCGGTGTACCGGGCTAAAGGTTGTAACAA ATGTAATCTTACTGGTTATCGTGGACGTATTGCTCTCCATGAATTTCTCGTAGTGGATAACTTATTGCGGGGGGCTATTT ATAAAGGGCTAGGAGAGTTTGAACTGGCTAAATTGGCCAGTGGGGCTATAAACAGCCTTCTATCTGATGGGATAAGCAAA GTTATTGCAGGGTTAACCACTATAGAGGAACTGGTAAGAATATGCCAAGAGGATGATAATGGCTGTATTTAA Protein sequence : MTDIESEFHTLPLTFSWSKSHGVLILPMAQGSQLICRKSATLEAILEGNRVAHSPILFNLVTDEEFENNLTERYQNNSAD PYQTMSVISNEIDIYSFANELSDDDDLLDINDEAPVIKLINSILVEAIKELASDIHIESFDKKLTVRFRIDGVLRKILEL QRHVALLLVSRIKVMAKLDIAEKRIPQDGRIALNLAGRALDVRVSVLPSSHGERVVMRLLDKNSIKLDLPSLGMSKDNCI SMNTQVHKPHGIILVVGPTGSGKSTTLYAALMGIDANEKNIMTVEDPIEFDIPGISQTQVNPKIEMTFARSLRAILRQDP DVILIGEIRDIETAQIAVQASLTGHLVLSTLHANSAIGAVTRLKDMNVEAFMLSSSLLAIISQRLVRRLCIACRQESSVT EKVLQRLNIDDKCSLVGSVYRAKGCNKCNLTGYRGRIALHEFLVVDNLLRGAIYKGLGEFELAKLASGAINSLLSDGISK VIAGLTTIEELVRICQEDDNGCI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-118 | 54 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-118 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A1122_00960 | YP_005519897.1 | general secretion pathway protein E | VFG2048 | Protein | 3e-118 | 54 |
| A1122_00960 | YP_005519897.1 | general secretion pathway protein E | VFG0182 | Protein | 1e-121 | 52 |
| A1122_00960 | YP_005519897.1 | general secretion pathway protein E | VFG1876 | Protein | 5e-111 | 47 |
| A1122_00960 | YP_005519897.1 | general secretion pathway protein E | VFG2426 | Protein | 1e-70 | 45 |
