Gene Information

Name : join (A1122_00005)
Accession : YP_005519710.1
Strain : Yersinia pestis A1122
Genome accession: NC_017168
Putative virulence/resistance : Virulence
Product : putative ferric siderophore receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4553479 - 1889 bp
Length : 2181 bp
Strand : -
Note : COG1629 Outer membrane receptor proteins, mostly Fe transport

DNA sequence :
ATGAAACACAAACACCTCTGGGTATTAAATCCGTGTCTGCTGGTCATGCTCACACCAGCGGCGTGGGCAGAGGATCAACT
TGTGGTTTCAGCCAACCGCTCACACCGCAGCGTGGCAGAAATGGCGCAAACAACTTGGGTGATTGAAGGCCAGGAACTTG
AACAACAAGTTCAAGGCGGCCTGGAAATCAAAGACATCTTGGCTCAATTGATCCCAGGTATCGACGTCAGCAGCCAAGGC
CGTACCAACTACGGCATGAACATGCGTGGCCGCTCAATCATGGTGATGATCGACGGCGTGCGGCTGAACTCTTCACGTAG
CGACAGCCGCCAACTCGATTCGATCGATCCGTTTAATATTGCACACATTGAAGTCATCTCCGGTGCGACGTCACTTTATG
GCGGGGGTAGCACGGGGGGCTTGATCAATATCGTGACCAAAAAAGGCCAGGAAGGAAAACAGGTTGAGTTGCAAATTGGC
GGCAAAACCGGCTTTAACAGCCATAACGACCACGATGAGAACATCTCGGCCGCCATGAGTGGGGGGACTGAGCGCGCATT
CGGCCGATTCTCTGTTTCTTATCAACGTTATGGGGGGTGGTACGACGGCAAAGGCAATGAGGTTTTGATCGACAACACCC
AGACCGGCTTGCAATATTCTAACCGTCTGGACGTGATGGGCACGGGAACCCTCAATATCGACGAAAACCAGCAATTGCAG
CTAACCACTCAGTATTTCAACAGCGAATCCGATGGCAAACACGGCTTGTATCTGGGGCAAAACTTCTCAGCAGTAACGGG
TACCGGGCAGGCCTCCAACAGCGCAGCGCTAAATTCAGACCGTATTCCGGGTACCGAACGCCATCTCATCAACTTGCAAT
ACTCCAACACGGATTTCTGGGGGCAGGATTTAGTGGCGCAAGTGTATTACCGTGATGAATCACTAACCTTCTACCCATTC
CCAACACTGAAAGATGGCAAGGTGAGCACTATCGGTGCATCACAGCAAAAAACCGATTTCTACGGCAGTAAACTGACATT
GAACAGTGAACCTATCGATAGCCTAACACTGACTTACGGTATCGATTTGGAACATGAAAGTTTCAATGCCAATCAACAGT
TCTTTAATCTGGCGAAGGCACAGCAATCCGGCGGCATGACGTTAGAAAATGCCTACAACGTTGGCCGTTACCCAAGTTAT
ACCACCACCAACCTGGCTCCCTTCTTACAAACCCGCTATGACATCAACCCGATTTTCACTCTGAGCGGCGGTGTGCGTTA
CCAGTACACAGAGAACAAGGTTGATGATTTTGTGGGTTACGCACAACAACAAGCGATTGCCAGCGGCTCCGCGACTTCCG
CTGATCCCGTACCTGGTGGGAAAACGGATTACAACAACTTCCTGTTCAATGCCGGTTTACTGGCGCACCTGACAGAAAGC
CAGCAGACCTGGTTCAACTTTTCACAAGGATTTGAGATCCCGGATCTGGCGAAATATTACGGTTCTGGCTCCTACACGCT
GGTTAACGGTCACTATCAGTTGCAAAACAGTGTCAACGTGAATGACTCCAAACTGGAGGGCATCAAGGTTGATTCCTATG
AGCTGGGCTGGCGCTATACCGGCGATAACCTGCGCACCCAAATGGCGGGTTATTACTCGCTTTCTGATCAGACTATCTCG
ATCAACAAAACAGACATGACCATCAATGTGTTACCGGATAAGCGCCGAATCTATGGGGTAGAAGGCGCAGTAGATTACTT
CTTCGATAACAGCGAATGGAGTGCCGGTGCAACATTTAACCTAATTAAGTCGGAAACTAAGGTTAGCGGTAAGTGGCAGA
AACTGACTATCGATGCTGCCAGCCCGTCGAAAGCCACCGCCTACATTGGCTGGGCACCGGGTGATTGGAATCTGCGCGTG
CAATCCCAACAAACGTTCGATGTTTCCGATAGCAAGGGTGACAAAATAGACGGTTACAACACCATCGATTTTCTCAGTAG
TTACGCCCTACCCGTGGGAAAACTCAGTTTCAGTATCGAAAACTTGCTGGACAAAGAGTACACCACCGTTTGGGGTCAGC
GCGCACCGATTCTGTATAGCCCAACCTACGGCTCACCCAACTTATACAGCTATAAGGGCCGTGGCCGGACTTTTGGTGTG
AACTACTCAGTGTTGTTCTGA

Protein sequence :
MKHKHLWVLNPCLLVMLTPAAWAEDQLVVSANRSHRSVAEMAQTTWVIEGQELEQQVQGGLEIKDILAQLIPGIDVSSQG
RTNYGMNMRGRSIMVMIDGVRLNSSRSDSRQLDSIDPFNIAHIEVISGATSLYGGGSTGGLINIVTKKGQEGKQVELQIG
GKTGFNSHNDHDENISAAMSGGTERAFGRFSVSYQRYGGWYDGKGNEVLIDNTQTGLQYSNRLDVMGTGTLNIDENQQLQ
LTTQYFNSESDGKHGLYLGQNFSAVTGTGQASNSAALNSDRIPGTERHLINLQYSNTDFWGQDLVAQVYYRDESLTFYPF
PTLKDGKVSTIGASQQKTDFYGSKLTLNSEPIDSLTLTYGIDLEHESFNANQQFFNLAKAQQSGGMTLENAYNVGRYPSY
TTTNLAPFLQTRYDINPIFTLSGGVRYQYTENKVDDFVGYAQQQAIASGSATSADPVPGGKTDYNNFLFNAGLLAHLTES
QQTWFNFSQGFEIPDLAKYYGSGSYTLVNGHYQLQNSVNVNDSKLEGIKVDSYELGWRYTGDNLRTQMAGYYSLSDQTIS
INKTDMTINVLPDKRRIYGVEGAVDYFFDNSEWSAGATFNLIKSETKVSGKWQKLTIDAASPSKATAYIGWAPGDWNLRV
QSQQTFDVSDSKGDKIDGYNTIDFLSSYALPVGKLSFSIENLLDKEYTTVWGQRAPILYSPTYGSPNLYSYKGRGRTFGV
NYSVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 0.0 66
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 0.0 66
iutA AAD44750.1 IutA Virulence SHI-2 Protein 0.0 66
iutA AAK71635.1 IutA Virulence SHI-3 Protein 0.0 66
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
join YP_005519710.1 putative ferric siderophore receptor VFG0619 Protein 0.0 66
join YP_005519710.1 putative ferric siderophore receptor VFG1085 Protein 0.0 66
join YP_005519710.1 putative ferric siderophore receptor VFG0936 Protein 0.0 66