Gene Information

Name : ribD (TC41_0946)
Accession : YP_005517418.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 967336 - 968451 bp
Length : 1116 bp
Strand : +
Note : -

DNA sequence :
ATGACCGAAGACGAGCGGTACATGCACATGGCGCTTGAGGTGGCGCGCCTGGGCGAAGGCCAGACGTCCCCAAACCCGAT
GGTCGGCGCCATCGTCGTGAACGGCGGGCGGGTGGTGGGCCAAGGCGCACACCTGATGGCGGGCACGCCGCACGCCGAGG
TGCATGCGCTGCGCATGGCGGGGGAGGCGGCGCGAGGCGCGACGCTCTACGTCACGCTCGAGCCGTGCAATCATCACGGC
AGGACGCCGCCCTGCACGGACGCCATCCTCGCCACAGGCGTTCGGCGCGTGGTGGTGGCCACGTTGGACGTGGATCCGCG
CACGGCCGGGCTCGGCGTGAAGCGCCTGCAGGAGGCCGGGATCGAGGTGACGGTCGGCGTGCTCGAAGCGGAGGCGCGCG
AACTGAACCGCCACTTCTTTCACCGCGTCGAGACCGGTCGCCCTTACGTGGTGTACAAGGTAGCCATGACGCTAAGCGGG
CACGTGGCCGCATCGAGTGGCCACAGCCAGTACGTGACCGGACTCGCGGCGCGCGAGGACGTGCATCGGCTGCGGCAGAT
CATCCCTGCCATCGGCGTCGGCGTCGGCACGGTCCTCGCGGACGATCCCGAGTTGACCGCGAGGGATCTCGCCACGGGGA
CAAGGCGAGATCGTCAGCCGCTTCGCGTGGTGTTCGACACGCGGCTTCGCACGCCGCCGACCGCGCGGCTGTTGGCGGCG
CCCGGGCGCACGGTTCTCCTCACGTCGGAGCGCATGGCCTCCGCTCCGGCCGCGAGGCGCCTCGCGGAACAGGGCGACGT
CCGCATCGCGCCGGTGGCCGAGCGGGACGGCCACCTGGATCTGCACGCGGCGCTTTCGGCCGTCGCAGCGGAAGGGGCGA
ATGCCCTTCTGGTGGAGGGCGGGCCCACGCTTGCGTCGGCGCTTCTTCAGAGCCGACTCATCGACGAGGTGCGCGTGTAT
GTGGCGCCCAAGCTCCTCGCGAGCGGGTTGCCCGCCTTCGCTGGCGCTTTCACCCAGTCGATGGCCGAGGCCGTTCAACT
TCACAGCGTGAGGAGCGAATGGCTGGGTGACCATCTCGTCCTCACAGGGCGAATTCACTATCGTGAGGAGGTGTGA

Protein sequence :
MTEDERYMHMALEVARLGEGQTSPNPMVGAIVVNGGRVVGQGAHLMAGTPHAEVHALRMAGEAARGATLYVTLEPCNHHG
RTPPCTDAILATGVRRVVVATLDVDPRTAGLGVKRLQEAGIEVTVGVLEAEARELNRHFFHRVETGRPYVVYKVAMTLSG
HVAASSGHSQYVTGLAAREDVHRLRQIIPAIGVGVGTVLADDPELTARDLATGTRRDRQPLRVVFDTRLRTPPTARLLAA
PGRTVLLTSERMASAPAARRLAEQGDVRIAPVAERDGHLDLHAALSAVAAEGANALLVEGGPTLASALLQSRLIDEVRVY
VAPKLLASGLPAFAGAFTQSMAEAVQLHSVRSEWLGDHLVLTGRIHYREEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-48 42
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-48 42