Gene Information

Name : kdpE (TC41_0327)
Accession : YP_005516814.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 306420 - 307118 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence :
GTGAGCGGTGCCAAGATTCTGGTGGCGGACGACGAGCGCGCCATTTTGAAGCTCATGCAGATTGCGCTCAAAGGACATGG
ATACGAGGTGCTGGAAGCTTCGAGCGGAGAAGAGGCGCTGGTTGTGGCGAGCACGAAGCGGCCAGATCTCGCCGTGATCG
ACTGGGGCCTTCCGGACATGGAAGGCATCGAGGTGTTGCGGCGGCTTCGCGAGTGGTCGAACATGCCCGTCATCATGCTG
ACCGTGCGCGATGCAGAGGAGGACAAGATTGCAGCGCTCGACGCTGGCGCGGACGATTACGTGGTGAAGCCGTTCGGCAT
GGGCGAACTGCTCGCGCGGATCCGGGTGGCCCTCCGGCACGCCGTGCGCGTGCAGGATGAACCCATCATCGAGGCGGCGG
GCCTCACCATCCACCTGGCGGAGCGGCGCGTGGAACTGAACGGCGAAACGGTGAAGCTGACGCCCATTGAGTACGATCTC
CTGAAAGCCCTCGCTCAACATGCGGGGAAGGTCGTGACACACAGGCAACTCCTGCGCCAGGTCTGGGGCGACGTCGATCC
CGACAACGCCGCCCACTACCTGCGCGTGTACATCGGACACCTGCGCAAAAAACTTGAGGACGATCCGTCCCGCCCCTGGC
GGATCGTGACCGAACCGGGCGTGGGCTATCGATTGGCGGTTGAACCGTCGGAGGCGTGA

Protein sequence :
MSGAKILVADDERAILKLMQIALKGHGYEVLEASSGEEALVVASTKRPDLAVIDWGLPDMEGIEVLRRLREWSNMPVIML
TVRDAEEDKIAALDAGADDYVVKPFGMGELLARIRVALRHAVRVQDEPIIEAAGLTIHLAERRVELNGETVKLTPIEYDL
LKALAQHAGKVVTHRQLLRQVWGDVDPDNAAHYLRVYIGHLRKKLEDDPSRPWRIVTEPGVGYRLAVEPSEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 5e-40 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 3e-40 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_005516814.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 6e-31 41