Gene Information

Name : TC41_3076 (TC41_3076)
Accession : YP_005519480.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2908992 - 2909810 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGAGGCATTGGTGGTCGCTCAGGTCGAGGAACAACTGTTGGACCTGGGCTTGAAGCGAGCTGCTGCCGTCTTGCC
GGCGTGCGTGGAGTGGGCCGCCGGGCAAGAGGCGACCTATGTCGCATTTCTCCAGCGTTTGCTGGAGGCTGAGCAGGAGG
AGCGGCACAGCCGGGCCATGCAGGCTCGGCTGCGCTTGGCGAACTTCCCGTTCCACAAGACCCTCGCCGACTTCGACTTC
TCGTTCCAGCCATCTGTGGATGAGCGCCAAATCCGAGAGCTCGCAACGCTAACGTTTGTCCAAGAATGCGGAAACGTGAT
TTTCCTAGGGCCTCCAGGGGTGGGAAAGACGCATTTGGCCGTGGCCCTCGGCATGGAGGCGATTCGCCAGCGGATGAGCG
TCTACTTCGTCACCATGCAGAAACTCGTGAGCGATTTTTTACGCCGAGCCTACCAAGAAGGGCGGCTGGACAGGCGGCTC
CGAGTCTATACGCAGCCAAAGATTCTGATCTGTGATGAGGTGGGCTACTTGCCTCTTGACGCGCTCGACGCCGCGAACTT
TTTCCGGCTGGTCTCAGAGAGGTACGAGCGAGGGTCGTTGCTCATCACGTCCAACACGAGTTTCACGAATTGGGGAACGC
TCTTTGGCGACCAGGTCCTGGCCGCCGCCTTACTCGACCGTTTGTTGCATCATGCAACGACCGTGAATATCCGTGGCAAC
AGTTACCGCATGAAAGACAAGCTGCGAGCTGGCGTTACGCACGGATTCTCGGCAACAAGAGACGAAGCGAACACATGTGT
GGGGAACGAATCGCGATGA

Protein sequence :
MSEALVVAQVEEQLLDLGLKRAAAVLPACVEWAAGQEATYVAFLQRLLEAEQEERHSRAMQARLRLANFPFHKTLADFDF
SFQPSVDERQIRELATLTFVQECGNVIFLGPPGVGKTHLAVALGMEAIRQRMSVYFVTMQKLVSDFLRRAYQEGRLDRRL
RVYTQPKILICDEVGYLPLDALDAANFFRLVSERYERGSLLITSNTSFTNWGTLFGDQVLAAALLDRLLHHATTVNIRGN
SYRMKDKLRAGVTHGFSATRDEANTCVGNESR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 4e-32 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 4e-32 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 4e-32 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 4e-32 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 4e-32 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 5e-32 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 4e-32 41
unnamed CAA21402.1 - Not tested HPI Protein 5e-32 41
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-31 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 6e-32 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 6e-32 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TC41_3076 YP_005519480.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 2e-32 41
TC41_3076 YP_005519480.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 2e-32 41
TC41_3076 YP_005519480.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 2e-32 41
TC41_3076 YP_005519480.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 2e-31 41