|
Name : clpC (TC41_3070) Accession : YP_005519474.1 Strain : Alicyclobacillus acidocaldarius Tc-4-1 Genome accession: NC_017167 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 2902660 - 2905098 bp Length : 2439 bp Strand : - Note : - DNA sequence : ATGATGTATGCACGGTTTACGGAGAGAGCTCAGAAGGTGTTGGCGCTGGCGCAAGAAGAGGCTTCTCGCCTGAATCACCC GGGCGTGGGCACCGAGCACATTTTGCTCGGCCTGATCCGCGAAGGCGAGGGGATTGCGGCGAAAGCCCTGCAGATGCTCG GCGTGCAGGCGGACAAGGTGCAACAGGAGATTGAGCGGATGGTGGGCCGCGGGCAGACCCCGGTCACGGCGATGACCTAC ACGCCGAGGGCGAAAAAGGTCATTGAGCTGTCCATCGACGAAGCCCGGAAGCTCGGTCACTCGTACGTGGGGACGGAGCA CCTGCTGCTCGGCCTGATTCGCGAGGGCGAAGGCGTTGCGGCGCGCGTGCTCGCCAACATGAACGTGAATCTGAACAAGG CGCGCCAGCAGGTGCTGCAGCTCTTGGGCGGCGACGCCATGGACATCGCGGGCGACAAAGACGCCTCCGTCGGCACGCCG ACGCTCGACAGCCTGGCGCGCGATCTGACGCAGATGGCGCGCGATGGCAAGCTGGATCCCGTCATCGGGCGAGAGAAGGA AATTGAGCGCGTGATTCAGGTGTTGTCGCGGCGCACCAAGAACAACCCGGTCCTCATCGGCGAACCCGGCGTCGGGAAGA CCGCCATCGCCGAAGGGCTGGCGCAGCGGATTGTGACGGGGGATGTGCCGGAGACACTGCGCAACAAGCGCGTGATGGTG CTCGACATGGGCACGGTGGTCGCCGGTACCAAGTACCGCGGTGAATTCGAGGATCGGTTGAAGAAGATTATGGATGAAAT CCGCCAGGCCGGAAACGTCATCCTGTTCATCGACGAGCTGCACACGCTCATCGGGGCGGGCGGCGCGGAGGGCGCCATCG ACGCGTCCAACATCCTGAAGCCGGCGCTTGCTCGTGGCGAGCTCCAATGCATCGGCGCGACCACGCTCGACGAATACCGC AAGCACATCGAGAAGGATCCGGCGCTCGAGCGGCGCTTCCAGCCCATCATGGTTGACGAGCCGTCGCCGGAGGAGGCGCT GGAGATCCTCAAGGGATTGCGGGATCGGTACGAAGCGCATCACCGCGTGAAGATCACGGACGAAGCGCTCGAGGCCGCGG TGAAGCTGTCGGATCGGTACATCTCGGATCGGTTCTTGCCGGATAAGGCCATCGACCTGATTGACGAGGCCGCTTCGCGC GTGAGGTTGCGCACGCACACCGCTCCTCCGAACCTCAAGGAACTGGAGCAGAAACTGGAGAAGGTGCGCAGCGAGAAGGA CGCCGCTGTGCAGAGCCAGGAGTTCGAGCTGGCGGCCAGCCTGCGCGATGAGGAGCAGAAGATCAAGGAGGAGCTCGAGC GGCTAAAGGAGACGTGGCAGAAGACGCAGCAGCTGGACGACGTGCGCGTGACGGAAGAAGATATCGCCCACATCGTGTCG TCGTGGACGGGAATCCCGGTACAGCAACTCCAGCAGGACGAGTCGGAGCGGCTGCTCAACCTGGAGAAGATCCTGCACGA GCGCGTCATTGGGCAGGACGAGGCGGTCGAGGCCGTGGCCAAGGCCATTCGCCGGGCGCGCGCTGGCCTGAAAGACCCGA AGAGGCCCATTGGTTCGTTCATCTTCCTCGGGCCGACGGGCGTTGGCAAGACGGAGCTCGCGCGTGCGCTCGCTGAAGCG CTGTTTGGCGATGAGGACGCGCTTATCCGCATTGACATGTCGGAGTACATGGAGCGCCACTCCACGTCGCGGCTCGTCGG ATCGCCGCCGGGATACGTGGGGTACGAGGAAGGCGGTCAGTTGACCGAGAAGGTGCGCCGGAAGCCGTATTCCGTGGTGC TTTTGGACGAGATCGAAAAGGCCCATCCGGAAGTGTTCAACATCCTGCTGCAGGTGCTGGACGACGGCCGGCTCACGGAC GGCAAGGGTCGCACGGTTGACTTCCGCAACACGGTCATCATTATGACCTCGAACGTGGGCGCCGAGGAGCTTCGCAAGGG CGGTGCGCTCGGCTTCAAGCGGGAAGAGGATAAGTATCTGGGCATGAAGGACAAGGTGATGGACGAACTCAAGCGCACCT TCCGGCCGGAGTTCCTCAACCGCATCGACGAGATCATCGTGTTCCACCCGCTGGATGAGACGCACATCGAGCGGATCGTG GACAAGATGGTGGACAATCTGAAGCGTCGCCTGAAAGAACAGGAGATCGAGTTCGAGCTCACGGACGAGGCGAAGAAGTT CCTCGCGAAGGTCGGGTTCGATCCGCAGTACGGCGCGCGGCCGCTGCAGCGGGCCATTGTCCGCAACGTCGAGGATCTCC TTTCGTCCGCGCTCATTGCGGGCGAGATCAAGAAGGGCGATCGCGTCCTGCTCGGCGTGGATGGCGACAAGTTGCGGATC GAAAAGGTGAACGAGCAGCCGGTCGGCGCGGGAGCGTGA Protein sequence : MMYARFTERAQKVLALAQEEASRLNHPGVGTEHILLGLIREGEGIAAKALQMLGVQADKVQQEIERMVGRGQTPVTAMTY TPRAKKVIELSIDEARKLGHSYVGTEHLLLGLIREGEGVAARVLANMNVNLNKARQQVLQLLGGDAMDIAGDKDASVGTP TLDSLARDLTQMARDGKLDPVIGREKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGDVPETLRNKRVMV LDMGTVVAGTKYRGEFEDRLKKIMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYR KHIEKDPALERRFQPIMVDEPSPEEALEILKGLRDRYEAHHRVKITDEALEAAVKLSDRYISDRFLPDKAIDLIDEAASR VRLRTHTAPPNLKELEQKLEKVRSEKDAAVQSQEFELAASLRDEEQKIKEELERLKETWQKTQQLDDVRVTEEDIAHIVS SWTGIPVQQLQQDESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEA LFGDEDALIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTD GKGRTVDFRNTVIIMTSNVGAEELRKGGALGFKREEDKYLGMKDKVMDELKRTFRPEFLNRIDEIIVFHPLDETHIERIV DKMVDNLKRRLKEQEIEFELTDEAKKFLAKVGFDPQYGARPLQRAIVRNVEDLLSSALIAGEIKKGDRVLLGVDGDKLRI EKVNEQPVGAGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 59 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-106 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005519474.1 | ATPase | VFG0079 | Protein | 0.0 | 73 |
| clpC | YP_005519474.1 | ATPase | VFG0080 | Protein | 1e-159 | 53 |
