Gene Information

Name : TC41_2995 (TC41_2995)
Accession : YP_005519401.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2842753 - 2843970 bp
Length : 1218 bp
Strand : -
Note : -

DNA sequence :
ATGGCTTCGCTCAACAGTTTCGCAGTTTTGGAATGGATTCGCAAGATGCAAGATGAGGATCACATCGACGTCTTACGTGA
GCTCATGCGACTGATCGCCCAATTCATGATCGACGCGGAAGCAGCGGAGAAAATCGGAGCTGAACGCTATGAACGAACCG
AAAGCCGTGTCACGCAACGAAACGGTTCGCGCTCCCGCACGTGGGATACACGCCTTGGAACCGTAGACCTGAAGATCCCG
AAACTTCGCCAAGGCAGCTTCTTCCCTTCGTTGCTCGAGCCCAGGAGACGAGCGGAGCAAGCGTTGGCGGCTGTCATCCA
GGAAGCATATGTGAAGGGCGTGAGCACCCGCAAGGTTGACGACCTAGTGCGAGCCCTGGGGCTGGAGGGCATCAGCAAAA
GTGAAGTTTCCCGTCTGTGTCAGCAGATGGACGAGGTCGTGCAACAGTTCAAAGAACGGCCGCTGGAACATGAGTATCCG
TACGTGTGGCTCGACGCTACCTTCCCGAAGGTTCGGGAAGGCGGTCGCGTGCAGAGCATGGCCTTGGTGATTGCGATCGG
GGTCACGGACACCGGCGAGCGAGAAGTGCTTGGGTTTGACGTCGGCACGAGCGAGGATGGCGCATTTTGGACGGACTTTC
TCCGGAAGCTGAAGGCACGTGGACTTCGAGGCGTGCGATTGGTTGTCAGCGACGCGCACGCGGGCTTGCGCCAGGCGATT
GCCGAGGTGCTCACGGGTGCAACCTGGCAACGATGCAAAGTACACGCACTGCGCAACGTGCTGAGTCAGGTGCCGAAGAA
AGAGCAGGCGATGGTCGCATCCATCCTCCGGACCATCTTTGCGCAATCGTCCCAAGAGGCGGCTCGCGAGCAACTCCGGC
GCGTCGTGGCCGAGCTGAAGGGGAGATTCCCGAAGGCGATGGATATCCTGTCCGATGCGGAAGACGATGTGTTGGCGTTC
ATGGCGTTGCCTTTCGAGCACTGGCGACAGATCTGCTCGACCAATCCGCTGGAGCGCCTGAATCGGGAGATGCGGAGGCG
GATGGACGTCGTGGGCATCTTCCCCAACCGGGACGCGGTGTTGCGACTGGCAGGCGCGATTTTGCAGGAGCAACACGAAG
AGTGGCTCGTGGCACGGCGGTACTTCAGCTTGGAGTCGATGGCCAAGCTCAAACCGAACAAGCCCCAGCTCGCAGCGGCA
GCCCTGTTACAAAAATAG

Protein sequence :
MASLNSFAVLEWIRKMQDEDHIDVLRELMRLIAQFMIDAEAAEKIGAERYERTESRVTQRNGSRSRTWDTRLGTVDLKIP
KLRQGSFFPSLLEPRRRAEQALAAVIQEAYVKGVSTRKVDDLVRALGLEGISKSEVSRLCQQMDEVVQQFKERPLEHEYP
YVWLDATFPKVREGGRVQSMALVIAIGVTDTGEREVLGFDVGTSEDGAFWTDFLRKLKARGLRGVRLVVSDAHAGLRQAI
AEVLTGATWQRCKVHALRNVLSQVPKKEQAMVASILRTIFAQSSQEAAREQLRRVVAELKGRFPKAMDILSDAEDDVLAF
MALPFEHWRQICSTNPLERLNREMRRRMDVVGIFPNRDAVLRLAGAILQEQHEEWLVARRYFSLESMAKLKPNKPQLAAA
ALLQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-24 YP_001800852.1 transposase for insertion sequence Not tested Not named Protein 3e-58 46
IS256 BAC22941.1 IS256 transposase Not tested etd PI Protein 2e-53 41
unnamed BAC67572.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 2e-53 41
unnamed BAC67574.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 2e-53 41
EF0529 NP_814305.1 IS256, transposase Not tested Not named Protein 3e-53 41
SERP1584 YP_189149.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 3e-53 41
SERP1587 YP_189152.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 3e-53 41