Gene Information

Name : TC41_2988 (TC41_2988)
Accession : YP_005519395.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2836714 - 2837727 bp
Length : 1014 bp
Strand : +
Note : -

DNA sequence :
GTGGGGCGGCTCGTGTTACGTGTGCCGAGGGTTCGAAATGGCGAATTCTCAACCGAGCTTTTTGCTCGGTATCAGCGTAG
CGAGCAAGCCTTCCTCCTTGCCTTGATGGAGATGGTGGTGAACGGCGTGTCGACTCGAGATGTGGCGAAGGTCACGGAGC
AGTTGTGTGGCACGTCCTTCTCGAAATCGACGGTTTCGGATCTGTGCAAACGCCTTGACCCGATCGTCCAGGCGTGGAAC
CAACGAAGCCTCGCCGAGCACCGCTATCCGTTTCTGCTCGTCGATGCCCTGGTCCTCCGGATTCGGGAAGACGGACGCAT
CCGTTCGCGCGCGGCTTTGATTGCCGTCGGTGTGAATGACGAGGGGTATCGAGAGATTCTCGGCTTGATGCTAGGCAACA
GCGAATCGGAATCGAGTTGGCGGGAGTTCGCTTGGCTGAAGCAACGCGGTTTGAGCGGCGTGGATATCGTCGTGTCCGAC
AGTCACAGCGGACTCGTCAAGGCGCTTCAGACCGAATTTCAGGGCTCGACGTGGCAACGGTGCCAGACCCATTTCATGCG
CAATCTCTTGGACGCCACACCCAAGGCGTTGCAGGAGGAGGTGTACCAGCAGGTACGCGCGATCCTCGATGCGCCGGATC
TGAAGACCGCGCGGTTGCTCAAGGAGGCATTTGTCGAAGCCTATGCAGAGAAAGCGCCGAAGGCGGTGCAGGTGTTGGAG
GATGGGTTTGATGATGTCACTGCGGTTTTGGTGCTACCTGAGCGATATCGGCGGCGTTTACGCACCACCAACGGTGTCGA
ACGGCTCAACGAAGAAATTCGGCGCCGCGAGCGCGTCATTCGCATCTTCCCCAACCGGGAATCAGCGATCCGTCTGCTGG
GGGCGTTACTGATGGAAATCGACGAAGAATGGACGACAGGGCGGAAATATCTCAACATGGACGAGTATGAGGAATGGAAG
AAGGCGCAACAGGCCTGGAGAGAATCAGCTCAGGCTTGTGCAGCAACGGCCTAA

Protein sequence :
MGRLVLRVPRVRNGEFSTELFARYQRSEQAFLLALMEMVVNGVSTRDVAKVTEQLCGTSFSKSTVSDLCKRLDPIVQAWN
QRSLAEHRYPFLLVDALVLRIREDGRIRSRAALIAVGVNDEGYREILGLMLGNSESESSWREFAWLKQRGLSGVDIVVSD
SHSGLVKALQTEFQGSTWQRCQTHFMRNLLDATPKALQEEVYQQVRAILDAPDLKTARLLKEAFVEAYAEKAPKAVQVLE
DGFDDVTAVLVLPERYRRRLRTTNGVERLNEEIRRRERVIRIFPNRESAIRLLGALLMEIDEEWTTGRKYLNMDEYEEWK
KAQQAWRESAQACAATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0529 NP_814305.1 IS256, transposase Not tested Not named Protein 2e-61 45
SERP1584 YP_189149.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 2e-61 45
SERP1587 YP_189152.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 2e-61 45
IS256 BAC22941.1 IS256 transposase Not tested etd PI Protein 1e-61 45
unnamed BAC67572.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 1e-61 45
unnamed BAC67574.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 1e-61 45