Gene Information

Name : TC41_2287 (TC41_2287)
Accession : YP_005518708.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Virulence
Product : amino acid permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2186035 - 2187402 bp
Length : 1368 bp
Strand : -
Note : -

DNA sequence :
ATGGAAGCTCCAGGGCATCGGGACCCCTCAACGTTCGGCTATCGCCAGGAATTGAAGCGATCCCTTCACTTGCGGGATCT
CATTGTCTACGGCATGATTTTCATGGTTCCCATTGCGCCTATGGCGATTTATGGCTATGTGGCGCAACAGAGCTTTGGCA
TGGTTCCCCTCGTGTACATCATCGGGATTGTCGCCATGGTCTTCACCGCGCTCAGTTACAAGCAGATGAGTGCCCAATTT
CCCATCGCAGGATCCGTGTATTCTTATGTGCAACGAGGCCTGAATCCGCACGTCGGCTTCGTCGCCGGATGGATGATCCT
CGCGGACTACCTCCTCGCACCGTCCCTGTTGTACGCGTTCTCGGCGGGTTGGCTTCACGGGCTCGTGCCGAGCGTTCCTA
CCTTCGTATGGCTTCTTTTCTTCGTCCTTTTCAACACCGTAGTCAACGTCCTGGGCATCACGCTGCAGGCGAAAACCAAC
TTCATTCTTCTGGCGATTGAGCTCGTCTGTCTTCTCATCTTTCTCATCGCTTCCGTGCGGTTTGTGTTTGTTCTGGGTCA
CGGAGCGGGGCATCTTTCGTTTCAGCCGTTTGACCAACCCGGTCACTTCAACTTGAAGTTCATCGAAAACGCCGCTTCTA
TCGCGGTGTTAAGCTTCCTCGGCTTCGACGCCATTAGCACCTTGGCAGAGGAAACGGAACGACCGGAGAAGACGGTGGGG
AATGCCACCATCGCGTCGCTTGTCATCATCGGCCTCCTGTTTGTTGTACAGACGTACATGGCGGCGCTCGTCCATCCGAA
CTACGCGGACCTGAATCCGAACATGGCGTTCTTCCAAATTGCGAAAGAAGCGGGAGGCACGTTCCTCTACGTCGTCCTCC
TGTTAGTCAACGCGGTGGCGTCAGGCATTGCGAATGCACTGGCCGCGCAGTCGGCCATCTCACGAATTCTGTATTCCATG
GGCCGCGACAATCTGCTGCCCTTTTCGAAGTTCTTCTCCCGTGTAAGTCCGAGATTCCAAACGCCGGTCAATGCGACGCT
GTTGGTCGCGGTGATTTCGCTGTTGGTGGCAAGCCTCGTGCCTCAAGAGACCATCACGACGCTGGTCAACTTTGGCGCAC
TGACTGCTTTCCTAATGTTGAACGCAACCGTGTTCGTGTACTTTTCCATTCGGCAGCGGGGTTTTCGGCACGTGTTCAGG
TATTTGTTGTTTCCTCTCTGCGGTTTTGTGGTCATCGGTTATGTGTGGCTCGGATTTGATCGGACCACGTTCATCTTCGG
CTTGAGCTGGATGGCGCTCGGGATCCTGATTGGGGCCGTCAAATCGAAAGGCTATCGGGAAGTTCCGCCCGTTTTGAAGG
ACATGTGA

Protein sequence :
MEAPGHRDPSTFGYRQELKRSLHLRDLIVYGMIFMVPIAPMAIYGYVAQQSFGMVPLVYIIGIVAMVFTALSYKQMSAQF
PIAGSVYSYVQRGLNPHVGFVAGWMILADYLLAPSLLYAFSAGWLHGLVPSVPTFVWLLFFVLFNTVVNVLGITLQAKTN
FILLAIELVCLLIFLIASVRFVFVLGHGAGHLSFQPFDQPGHFNLKFIENAASIAVLSFLGFDAISTLAEETERPEKTVG
NATIASLVIIGLLFVVQTYMAALVHPNYADLNPNMAFFQIAKEAGGTFLYVVLLLVNAVASGIANALAAQSAISRILYSM
GRDNLLPFSKFFSRVSPRFQTPVNATLLVAVISLLVASLVPQETITTLVNFGALTAFLMLNATVFVYFSIRQRGFRHVFR
YLLFPLCGFVVIGYVWLGFDRTTFIFGLSWMALGILIGAVKSKGYREVPPVLKDM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 1e-51 42
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 1e-51 42
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 6e-51 41
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 6e-51 41
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 6e-49 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TC41_2287 YP_005518708.1 amino acid permease VFG0480 Protein 5e-52 42