Gene Information

Name : TC41_0224 (TC41_0224)
Accession : YP_005516719.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 212743 - 213837 bp
Length : 1095 bp
Strand : +
Note : -

DNA sequence :
ATGGACACGCATCTCGGATATGCCAAATACGACGCGAAGCACAAAGATACGGATAACGCCCGAAATGGCCACGGCGCCAA
GCGGACGGTGCAGTCCGAACTCGGTGAGATCGAGATCGCGCTTCCTCGAGACCGAAAAGGCGAGTTTGAGCCTGCGATTG
TGCAAAAACGCCAGAAGCGCATGCCAAGTATCGAGGAACAGGTCATTGCCCTTTATGCTCGTGGCTTCAGCACGAGGGAT
ATCCAGGACCACCTCCTGCAGATCTACGGCGTAGAGATATCTCCCACGCTGGTGTCGAACCTCACCGATCGCCTCTTGCC
GCGGATTCAGGAGTGGCAGAATCGTCCATTGCACCCCCTCTATACCGTCGTCTTCCTCGACGCCATTCACTACAAGGTGC
GCGAAGAAGGCCGCTTGGTAAGCAAGGCGGCGTACATGGTCATTGGCATCGACATCGAGGGTCAGAAAGATGTGCTGGGC
ATCTGGATTGGGCAGAGTGAGTCCTCGAAGTTCTGGCTAGGCGTGTTGAATGACCTGAAGGCGCGTGGCGTGCAGGATGT
GCTCGTCTTTTCGACGGACAACCTGAAGGGATTCAGCGAAGCCATCGCCGCCTGTTTCCCGCAATCCGATGTCCAAAAAT
GCATCGTCCACCAAATTCGCAATTCGCTGCGGTATGTGTCCTACAAGGATTTAAAGGCGGTCGCGGCAGCACTCAAGCCC
ATCTATCAGGCACCCACGGAAGAGGCGGCCTTGATGGAGCTTGACCAGTTTGAACGGGTATGGGGAGCGCGCTATCCCCT
GTGTGTGAAGTCGTGGCGAGACAACTGGACGGAGCTCGCGACGTTCTATCGGTACCCCGTGGAAATGCGGCGAATCATGT
ATACGACGAACATCATCGAGGGCTACCACAGGCAGTTACGAAAAGCGACGAAGGGCAAGAGCATGTTCCCAAACGACGAG
TCGTTGTTGAAGATGCTGTATCTGGCGACGATGGAGGTGACGAGAAAATGGACGATGCGGGTGGCCAACTGGGGCACCAT
TCTAGGGCAACTAGCCATCTACTTCGGGGACCGAGTGACGCCATACCTGCCATGA

Protein sequence :
MDTHLGYAKYDAKHKDTDNARNGHGAKRTVQSELGEIEIALPRDRKGEFEPAIVQKRQKRMPSIEEQVIALYARGFSTRD
IQDHLLQIYGVEISPTLVSNLTDRLLPRIQEWQNRPLHPLYTVVFLDAIHYKVREEGRLVSKAAYMVIGIDIEGQKDVLG
IWIGQSESSKFWLGVLNDLKARGVQDVLVFSTDNLKGFSEAIAACFPQSDVQKCIVHQIRNSLRYVSYKDLKAVAAALKP
IYQAPTEEAALMELDQFERVWGARYPLCVKSWRDNWTELATFYRYPVEMRRIMYTTNIIEGYHRQLRKATKGKSMFPNDE
SLLKMLYLATMEVTRKWTMRVANWGTILGQLAIYFGDRVTPYLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 4e-92 49
c5176 NP_757024.1 transposase Not tested PAI II CFT073 Protein 4e-60 46
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 6e-93 46
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 8e-73 41
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 3e-74 41
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 6e-75 41