Gene Information

Name : TC41_1839 (TC41_1839)
Accession : YP_005518274.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1772235 - 1773059 bp
Length : 825 bp
Strand : -
Note : -

DNA sequence :
ATGTGCCAACTCCTACGGGTTTCTCGGAGCGGGTATTACGCCTGGTGCAAACGCCCGGAAAGCCAACGTGCGAAGCGACG
CAAGCGCTTGATTCGACGGATTCACGAGTTGTTTGTGGAGTCCAGGCGCTTGTACGGCAGTCCGAAGATTACGGCACTTC
TTCGTCGAGAAGGAGAACGCATTGCTCAAAAGACCGTGGCGCGTTGGATGAAAGAGCACGGCCTCCGAAGCCGGACGGTG
CGCAAGCACAAGGCCACCACGGCGTCACAACACACGTATCCTGTGCACAAGAACGTGCTCGACCAACGCTTTGTGACGGA
GCACCCCGGTCAGGTGTACATGGCCGATATCACGTACATCCCGACCGACGAGGGGTGGGTGTATCTGGCGAGCGTGGAGG
ACTTGTATACTCGAAAGATCGTCGGATGGCGTGCGGATGCACGCATGACGAAAGAACTTTGCTTGGACGCACTTGATCAG
GCCTATCGACGAGGACGGCGCAGAGAAGGATGTGTCACGCTCCATCATTCGGATCGCGGTAGCCAATACGCGTCGCACGA
GTATCAAGATCGCCTACGAGCGTATGGTATGGTGCCAAGCATGAGTCGAAAGGGAAACTGTTATGACAATGCCTGCATGG
AATCCTTTCACAGCGTTCTCAAGCGGGAACTCATCTATCTGGAGCGATTCAAAACGCGTGCGGAGGCCATCCAGCGGATT
TTTGAGTACATCGAAGTCTGGTACAACCGAAAGCGAATCCACGCATCCATCGGATACCATACCCCGGACGAATGGGAGCG
GTGTTATTTTGCGAATACGGGTTGA

Protein sequence :
MCQLLRVSRSGYYAWCKRPESQRAKRRKRLIRRIHELFVESRRLYGSPKITALLRREGERIAQKTVARWMKEHGLRSRTV
RKHKATTASQHTYPVHKNVLDQRFVTEHPGQVYMADITYIPTDEGWVYLASVEDLYTRKIVGWRADARMTKELCLDALDQ
AYRRGRRREGCVTLHHSDRGSQYASHEYQDRLRAYGMVPSMSRKGNCYDNACMESFHSVLKRELIYLERFKTRAEAIQRI
FEYIEVWYNRKRIHASIGYHTPDEWERCYFANTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-42 46
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 5e-43 46
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 5e-43 46
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-42 46
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-42 46
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-42 46
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-42 46
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-42 46
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 1e-40 45
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-39 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 5e-41 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-41 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-41 42
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 8e-24 42
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 9e-39 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 9e-39 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 9e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TC41_1839 YP_005518274.1 transposase VFG1706 Protein 7e-43 46
TC41_1839 YP_005518274.1 transposase VFG1631 Protein 1e-39 42