Gene Information

Name : xerD (TC41_1649)
Accession : YP_005518097.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1608728 - 1609612 bp
Length : 885 bp
Strand : -
Note : -

DNA sequence :
GTGGACCCAGACATTCGCACCTTTTTGGATCATCTCCGGCTGGAGCGAGGTCTCTCGGAAAATACGGCTACAAGTTACGC
GCGAGACTTGACCGATTTCTGTCGCTACCTCGCGCGAGAGCATCGGACCATCCGAGATGCGGACCGTACGGCCGTGCTCC
GCTATCTGTCCGACCTGAAGGGGCGAGGCATGAAATCGACGACCATTGCTCGCAGGATGTCTGCGCTTCGCTCGTTCTTC
CGCTACCTTCTGCGTGAAGGCGTCCTCGAAGCGGATCCGACGGCGCACATCGAGGTGGCGGCTCCGGACGAGCACCTTCC
TCGGGTCGTCTCGGAAGAGGACGTGGAACGGCTGATGGCCGCCGTCCGTCGACCGGATGCCATGGGACTGCGCGATCGCG
CCATGCTAGAGACGCTCTACGCCACGGGGATGCGTGTGAGCGAGCTTGTGGCGCTGTCGCTCGAAGACGTCGAGCTGGCC
GCCGGATTCGTCCGCGTGTTCGGAAAGGGCAAGAAGGAGCGCGTGGTGCCACTGGGCGAGATGGCCCAGGATGCCCTCCG
TCTGTACCTGCGCTACGGCAGGCCGCTTCTGGTGCGGGACCGGGGAGAAGGCGCGGTGTTTGTCAATCGCTTTGGCCGGC
GGCTCACTCGGCAAGGGTTCTGGAACATCTTGAAGGGCTATGCACAGCAGGCAGGCGTATCGGTCGAGGTCACACCGCAC
ACGCTTCGGCACTCGTTCGCCACCCATTTACTGGAGGGCGGCGCGGATCTCCGAGTCGTTCAGGAACTCCTGGGACACGC
CGACATCTCGACGACGGAGCGGTACACGCACGTCACACCGCATAGGCTGCGCGAGGTGTATCGCAACGCGCATCCGCGGG
CGTAA

Protein sequence :
MDPDIRTFLDHLRLERGLSENTATSYARDLTDFCRYLAREHRTIRDADRTAVLRYLSDLKGRGMKSTTIARRMSALRSFF
RYLLREGVLEADPTAHIEVAAPDEHLPRVVSEEDVERLMAAVRRPDAMGLRDRAMLETLYATGMRVSELVALSLEDVELA
AGFVRVFGKGKKERVVPLGEMAQDALRLYLRYGRPLLVRDRGEGAVFVNRFGRRLTRQGFWNILKGYAQQAGVSVEVTPH
TLRHSFATHLLEGGADLRVVQELLGHADISTTERYTHVTPHRLREVYRNAHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-46 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-46 41