Gene Information

Name : glnA (TC41_1524)
Accession : YP_005517975.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1499566 - 1500987 bp
Length : 1422 bp
Strand : +
Note : -

DNA sequence :
TTGACGCCGCGCGATATTCTCGAACTCATGAAGCAGCACGAAGTTCAGATGGTGGATTTTCGCATTGTGGACGTCCCGGG
CCGCCAGCATCACGTCACCGTGCCCGCGGCCGAGATCGACGAAGAGGTCTTAGAACGAGGAGTCGCATTCGATGGATCGA
GTGTCCCTGGGTTCCGGGGCATCGAAGAGAGCGATATGGTGATGCGCCCGGTGCTCGAGACAGCCTTCTTAGATCCGTTC
ACGGAGGTCCCGACACTCGCCGTCACGTGCAACGTGTACGAACCGAGTGGGAACCGGTACGAGCGAGATCCCCGTTATAT
CGCGGAGAAAGCGGAACAATATCTGAAGTCGACGGGCATCGCGACAACCGCGTACTTTGGGCCGGAGCTGGAGTTCTTTA
TTTTCGACGACGTCCGGTTCGACTCCACGCAGAGCGGTGCGTTTTACGCCATCGACTCCGAAGAAGCGGTGTGGAACACC
GGCACCGGCGCGAAAAACCTTGGCTATCACGTGAAGAACAAGAGTGGCTATTTCCCCGTCGCACCGACGGACACGCAGCA
GGATATCCGCACCGAAATGGTGCTCGAATTGATGAAGGCGGGCATTCGCGTCGAGCGGCATCACCACGAGGTGGCAACGG
CGGGTCAGGCGGAAATCAACTTCCGATTCGGCACCCTCACCCGCACCGCGGATACGGTCATGACGTACAAGTACATCGTG
CGCAACGTCGCCCGCCGGCACGGCAAGACGGCCACGTTTATGCCGAAGCCGATTTTCGGCGACAACGGTTCGGGCATGCA
CGTTCACCAAAGCTTGTTCAACGGCGACGAACCGCTGTTCTACCGCGAAGGCGGCTATGCGAATCTGAGCGACATTGCGC
TTCAGTATATTGCGGGCATTCTCTATCACGCGCCGGCGATTCTCGCGTTCTCGAACCCGAGCACGAACTCCTACAAGCGA
CTGGTGCCTGGGTACGAAGCGCCGGTGAACCTGGTGTTCTCGCGCGGCAACCGCAGCGCAGCCATTCGCGTTCCGGTGGC
GGTTGTTTCGCCGAAGACCGCGCGCATTGAGTTCCGCACGCCGGATTGTACGGCCAACCCGTACCTCGCGTTCGCGGCGA
TGCTCATGGCCGGCTTAGACGGCATTCGCAGAAAACTGGATCCGACGGAACTCGGATTTGGTCCCATCAACAAAAACATC
TACGAGCTTTCCGCGGAGGAAAAGGCGCAGATCAAGAGCGTGCCAGGCTCGCTCGGCGAGGTGCTCGACGCGCTCGAAGC
GGATCACGAGTTCCTCCTGGAAGGCGGCGTCTTCACGAAAGATTTCATTCGCAACTGGATCGATTTCAAGCGGAACAACG
AACTGGCGCCGCTCCACTTGCGCCCGCATCCCTACGAGTTCTCGCTGTACTTCGATCTGTGA

Protein sequence :
MTPRDILELMKQHEVQMVDFRIVDVPGRQHHVTVPAAEIDEEVLERGVAFDGSSVPGFRGIEESDMVMRPVLETAFLDPF
TEVPTLAVTCNVYEPSGNRYERDPRYIAEKAEQYLKSTGIATTAYFGPELEFFIFDDVRFDSTQSGAFYAIDSEEAVWNT
GTGAKNLGYHVKNKSGYFPVAPTDTQQDIRTEMVLELMKAGIRVERHHHEVATAGQAEINFRFGTLTRTADTVMTYKYIV
RNVARRHGKTATFMPKPIFGDNGSGMHVHQSLFNGDEPLFYREGGYANLSDIALQYIAGILYHAPAILAFSNPSTNSYKR
LVPGYEAPVNLVFSRGNRSAAIRVPVAVVSPKTARIEFRTPDCTANPYLAFAAMLMAGLDGIRRKLDPTELGFGPINKNI
YELSAEEKAQIKSVPGSLGEVLDALEADHEFLLEGGVFTKDFIRNWIDFKRNNELAPLHLRPHPYEFSLYFDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-94 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_005517975.1 glutamine synthetase, type I VFG1399 Protein 7e-132 55