Gene Information

Name : TC41_1439 (TC41_1439)
Accession : YP_005517893.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1415733 - 1416548 bp
Length : 816 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGAGGCATTGGTGGTCGCTCAGGTCGAGGAACAACTGTTGGACCTGGGCTTGAAGCGAGCTGCTGCCGTCTTGCC
GGCGTGCGTGGAGTGGGCCGCCGGGCAAGAGGCGACCTATGTCGCATTTCTCCAGCGTTTGCTGGAGGCTGAGCAGGAGG
AGCGGCACAGCCGGGCCATGCAGGCTCGGCTGCGCTTGGCGAACTTCCCGTTCCACAAGACACTCGCCGACTTCGACTTC
TCGTTCCAGCCATCTGTGGATGAGCGCCAAATCCGAGAGCTCGCAACGCTAACGTTTGTCCAAGAATGCGGAAACGTGAT
TTTCCTAGGGCCTCCAGGGGTGGGAAAGACGCATTTGGCCGTGGCCCTCGGCATGGAGGCGATTCGCCAGCGGATGAGCG
TCTACTTCGTCACCATGCAGAAACTCGTGAGCGATTTACGCCGAGCCTACCAAGAAGGGCGGCTGGACAGGCGGCTCCGA
GTCTATACGCAGCCAAAGATTCTGATCTGTGATGAGGTGGGCTACTTGCCTCTTGACGCGCTCGACGCCGCGAACTTTTT
CCGGCTGGTCTCAGAGAGGTACGAGCGAGGGTCGTTGCTCATCACGTCCAACACGAGTTTCACGAATTGGGGAACGCTCT
TTGGCGACCAGGTCCTGGCCGCCGCCTTACTCGACCGTTTGTTGCATCATGCAACGACCGTGAATATCCGTGGCAACAGT
TACCGCATGAAAGACAAGCTGCGAGCTGGCGTTACGCACGGATTCTCGGCAACAAGAGACGAAGCGAACACATGTGTGGG
GAACGAATCGCGATGA

Protein sequence :
MSEALVVAQVEEQLLDLGLKRAAAVLPACVEWAAGQEATYVAFLQRLLEAEQEERHSRAMQARLRLANFPFHKTLADFDF
SFQPSVDERQIRELATLTFVQECGNVIFLGPPGVGKTHLAVALGMEAIRQRMSVYFVTMQKLVSDLRRAYQEGRLDRRLR
VYTQPKILICDEVGYLPLDALDAANFFRLVSERYERGSLLITSNTSFTNWGTLFGDQVLAAALLDRLLHHATTVNIRGNS
YRMKDKLRAGVTHGFSATRDEANTCVGNESR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-33 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-33 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-33 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-33 41
unnamed CAA21402.1 - Not tested HPI Protein 3e-33 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-33 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-33 41
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-32 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-33 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-33 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-33 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TC41_1439 YP_005517893.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 1e-33 41
TC41_1439 YP_005517893.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 1e-33 41
TC41_1439 YP_005517893.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 7e-33 41
TC41_1439 YP_005517893.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 1e-33 41