Gene Information

Name : TC41_1100 (TC41_1100)
Accession : YP_005517568.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1094884 - 1095786 bp
Length : 903 bp
Strand : +
Note : -

DNA sequence :
GTGTATGCCTGGATCCACAAGCACCGCTCCGAATTTCCGGTTCAGAAGATGTGCAAAGTCCTCGGTGTATCTCGGAGCGG
CTACTACGCATGGCGCGGACGGCCCGAAAGTCTTCGGGCCAAGCGCAGGAAGCGACGGATTCGTCGCATTCATGAACTGT
TCCTGCAATCTCGTCGATTGTATGGGAGTCCAAAGATCACAGCGCTCCTACGTCGGGACGGGGAACGCATCGCACAAAAG
ACGGTAGCGCGTCTCATGCGAGAGCACGGGCTTCGGAGTCGTACCGTACGCAAGTACAAAGCGACAACCGATTCGAAGCA
TCGTCATCCCGTGCATGAGAACGTCCTCAATCAACGCTTTGTGGCAGAACGGCCAGGACAGGTCTATATGGCAGATATCA
CGTACATTCCGACAGATGAAGGCTGGGTGTATCTTGCCAGCGTTGAAGATCTGTACAGCCGTAAGATTGTGGGTTGGAAC
GCAGGTGCGAGGATGTCCAAAGAGCTCTGCATCCGCGCGTTGGAGCAAGCACACAAACACAGGCAGCAACGCGACGGCGT
TGTCCTGCACCATTCGGATCGTGGAAGCCAGTACGCGTCGCATGAGTATCAGAACCGGCTCAGAGCCTATGGGATGACGG
CAAGCATGAGTCGGAAAGGGAATTGTTATGACAATGCTTGTATGGAATCATTCCACAGCGTGCTCAAGCGAGAACTCGTG
TACCTAGAGAGATTCCGGACGCGAGCTGAGGCCATCCGACGGATCTTCGAGTACATCGAAATCTGGTACAACCGACAACG
GATCCACGGTGCAGTTGGGTATCGGACGCCCGATGACGTCGAGCGCCAATACTTCGAGGCGAAGTTGAAAGGTGTCGGTG
CAGATGGCCAAGTGAGTGCTTGA

Protein sequence :
MYAWIHKHRSEFPVQKMCKVLGVSRSGYYAWRGRPESLRAKRRKRRIRRIHELFLQSRRLYGSPKITALLRRDGERIAQK
TVARLMREHGLRSRTVRKYKATTDSKHRHPVHENVLNQRFVAERPGQVYMADITYIPTDEGWVYLASVEDLYSRKIVGWN
AGARMSKELCIRALEQAHKHRQQRDGVVLHHSDRGSQYASHEYQNRLRAYGMTASMSRKGNCYDNACMESFHSVLKRELV
YLERFRTRAEAIRRIFEYIEIWYNRQRIHGAVGYRTPDDVERQYFEAKLKGVGADGQVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-46 46
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 7e-47 46
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 7e-47 46
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 2e-46 46
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-46 45
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-46 45
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-46 45
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-46 45
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 1e-44 45
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 6e-46 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 8e-46 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-45 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 5e-45 42
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 4e-43 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-43 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TC41_1100 YP_005517568.1 transposase VFG1706 Protein 1e-46 46
TC41_1100 YP_005517568.1 transposase VFG1631 Protein 3e-46 42