Gene Information

Name : TC41_1056 (TC41_1056)
Accession : YP_005517526.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1059682 - 1060410 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence :

GTGGAGTGGGCCGCCGGGCAAGAGGCGACCTATGTCGCATTTCTCCAGCGTTTGCTGGAGGCTGAGCAGGAGGAGCGGCA
CAGCCGGGCCATGCAGGCTCGGCTGCGCTTGGCGAACTTCCCGTTCCACAAGACACTCGCCGACTTCGACTTCTCGTTCC
AGCCATCTGTGGATGAGCGCCAAATCCGAGAGCTCGCAACGCTAACGTTTGTCCAAGAATGCGGAAACGTGATTTTCCTA
GGGCCTCCAGGGGTGGGAAAGACGCATTTGGCCGTGGCCCTCGGCATGGAGGCGATTCGCCAGCGGATGAGCGTCTACTT
CGTCACCATGCAGAAACTCGTGAGCGATTTACGCCGAGCCTACCAAGAAGGGCGGCTGGACAGGCGGCTCCGAGTCTATA
CGCAGCCAAAGATTCTGATCTGTGATGAGGTGGGCTACTTGCCTCTTGACGCGCTCGACGCCGCGAACTTTTTCCGGCTG
GTCTCAGAGAGGTACGAGCGAGGGTCGTTGCTCATCACGTCCAACACGAGTTTCACGAATTGGGGAACGCTCTTTGGCGA
CCAGGTCCTGGCTGCCGCCTTACTCGACCGTTTGTTGCATCATGCAACGACCGTGAATATCCGTGGCAACAGTTACCGCA
TGAAAGACAAGCTGCGAGCTGGCGTTACGCACGGATTCTCGGCAACAAGAGACGAAGCGAACACATGTGTGGGGAACGAA
TCGCGATGA

Protein sequence :

MEWAAGQEATYVAFLQRLLEAEQEERHSRAMQARLRLANFPFHKTLADFDFSFQPSVDERQIRELATLTFVQECGNVIFL
GPPGVGKTHLAVALGMEAIRQRMSVYFVTMQKLVSDLRRAYQEGRLDRRLRVYTQPKILICDEVGYLPLDALDAANFFRL
VSERYERGSLLITSNTSFTNWGTLFGDQVLAAALLDRLLHHATTVNIRGNSYRMKDKLRAGVTHGFSATRDEANTCVGNE
SR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
y1094	CAD33719.1	ORF B protein	Not tested	PAI I 536	Protein	2e-29	43
unnamed	CAB46598.1	IS100 transposase	Not tested	HPI	Protein	8e-33	43
s0036	CAD33774.1	ORF B protein	Not tested	PAI I 536	Protein	8e-33	43
y1093	CAD42087.1	OrfB protein of IS100 transposase	Not tested	PAI II 536	Protein	8e-33	43
orfB	CAE85183.1	OrfB protein, transposase, IS100	Not tested	PAI V 536	Protein	8e-33	43
YPTB1586	YP_070114.1	transposase/IS protein	Not tested	HPI	Protein	1e-32	43
api84	CAF28558.1	putative transposase	Not tested	YAPI	Protein	8e-33	43
unnamed	CAA21402.1	-	Not tested	HPI	Protein	1e-32	43
y1093	CAC43411.1	IS100 transposase; transposase ORFA	Not tested	PAI III 536	Protein	8e-33	43
y1093	CAD66188.1	transposase Orf B, insertion element IS100	Not tested	PAI III 536	Protein	6e-32	43
YPO1901	YP_002346891.1	transposase/IS protein	Not tested	HPI	Protein	1e-32	43
y2410	NP_669717.1	transposase/IS protein	Not tested	HPI	Protein	1e-32	43
aec58	AAW51741.1	Aec58	Not tested	AGI-3	Protein	8e-33	42

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
TC41_1056	YP_005517526.1	IstB domain-containing protein ATP-binding protein	VFG1460	Protein	1e-29	43
TC41_1056	YP_005517526.1	IstB domain-containing protein ATP-binding protein	VFG1627	Protein	5e-33	43
TC41_1056	YP_005517526.1	IstB domain-containing protein ATP-binding protein	VFG1606	Protein	5e-33	43
TC41_1056	YP_005517526.1	IstB domain-containing protein ATP-binding protein	VFG1663	Protein	3e-32	43
TC41_1056	YP_005517526.1	IstB domain-containing protein ATP-binding protein	VFG1515	Protein	5e-33	43